6YE2
Human Ecto-5'-nucleotidase (CD73) in complex with the AMPCP derivative A1202 (compound 4a in publication) in the closed form (crystal form IV)
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | BESSY BEAMLINE 14.2 |
Synchrotron site | BESSY |
Beamline | 14.2 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2016-10-05 |
Detector | DECTRIS PILATUS 2M |
Wavelength(s) | 0.91826 |
Spacegroup name | P 21 21 2 |
Unit cell lengths | 93.360, 230.940, 53.970 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 46.730 - 2.440 |
R-factor | 0.178 |
Rwork | 0.175 |
R-free | 0.23000 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 6ye1 |
RMSD bond length | 0.010 |
RMSD bond angle | 1.180 |
Data reduction software | XDS |
Data scaling software | XDS |
Phasing software | BUSTER (2.10.3) |
Refinement software | BUSTER (2.10.3) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 46.730 | 46.730 | 2.590 |
High resolution limit [Å] | 2.440 | 7.240 | 2.440 |
Rmerge | 0.114 | 0.026 | 0.822 |
Rmeas | 0.130 | 0.030 | 0.936 |
Total number of observations | 195708 | ||
Number of reflections | 44292 | 1848 | 7024 |
<I/σ(I)> | 11.24 | 38.08 | 1.95 |
Completeness [%] | 99.4 | 97.8 | 98.9 |
Redundancy | 4.419 | 4.182 | 4.426 |
CC(1/2) | 0.997 | 0.999 | 0.828 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 291 | 1 mM ZnCl2, 11-14% PEG6000, 15 % Glycerol, 100 mM sodium citrate pH 5.4-5.6 |