6Y60

Structure of Human Polyomavirus 12 VP1 in complex with 3'-Sialyllactosamine

This is a non-PDB format compatible entry.

Entity

Entity ID	Chain ID	Description	Type	Chain length	Formula weight	Number of molecules	DB Name (Accession)	Biological source	Descriptive keywords
1	AAA, BBB, CCC, DDD, EEE...	Capsid protein VP1	polymer	277	30708.7	10	UniProt (M4T5D3) Pfam (PF00718) In PDB	Human polyomavirus 12
2	A, B, C, D, E...	N-acetyl-alpha-neuraminic acid-(2-3)-beta-D-galactopyranose	branched		471.4	7	In PDB GlyTouCan (G30207PZ)
3	AAA, BBB, CCC, DDD, EEE	PHOSPHATE ION	non-polymer		95.0	5	Chemie (PO4)
4	BBB, CCC, GGG	N-acetyl-alpha-neuraminic acid	non-polymer		309.3	3	Chemie (SIA)
5		water	water		18.0	1825	Chemie (HOH)

Sequence modifications

AAA, BBB, CCC, DDD, EEE, FFF, GGG, HHH, III, JJJ: 27 - 299 (UniProt: M4T5D3)

PDB	External Database	Details
Gly 23	-	expression tag
Ser 24	-	expression tag
His 25	-	expression tag
Met 26	-	expression tag

Contents of the asymmetric unit

Polymers	Number of chains	10
	Total formula weight	307086.6
Branched	Number of molecules	7
	Total formula weight	3299.9
Non-Polymers*	Number of molecules	8
	Total formula weight	1402.7
All*	Total formula weight	311789.2

*Water molecules are not included.