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6Y5D

Structure of human cGAS (K394E) bound to the nucleosome

Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1A, E, M, Q
(A, E, M, Q)
Histone H3.2polymer9811456.34UniProt (Q71DI3)
Pfam (PF00125)
Homo sapiens (Human)Histone H3/m,Histone H3/o
2B, F, N, R
(B, F, N, R)
Histone H4polymer10311394.44UniProt (P62805)
Pfam (PF15511)
Homo sapiens (Human)
3C, G, O, S
(C, G, O, S)
Histone H2A type 2-Apolymer13014125.54UniProt (Q6FI13)
Pfam (PF00125)
Pfam (PF16211)
Homo sapiens (Human)Histone H2A.2,Histone H2A/o
4D, H, P, T
(D, H, P, T)
Histone H2B type 1-Kpolymer12613921.24UniProt (O60814)
Pfam (PF00125)
Homo sapiens (Human)H2B K,HIRA-interacting protein 1
5I, U
(I, U)
DNA (153-MER)polymer15346998.92Homo sapiens
6J, V
(J, V)
DNA (153-MER)polymer15347457.22Homo sapiens
7K, L
(K, L)
Cyclic GMP-AMP synthasepolymer36242404.82UniProt (Q8N884)
Pfam (PF03281)
Pfam (PF20266)
Homo sapiens (Human)h-cGAS,2'3'-cGAMP synthase,Mab-21 domain-containing protein 1
8AA, DA, EA, FA, GA...
(H, M, O, S, A...)
PENTANEDIALnon-polymer100.19Chemie (PTD)
9BA, CA
(K, L)
ZINC IONnon-polymer65.42Chemie (ZN)
Sequence modifications
A, E, M, Q: 39 - 136 (UniProt: Q71DI3)
PDBExternal DatabaseDetails
Ala 111Cys 111conflict
K, L: 161 - 522 (UniProt: Q8N884)
PDBExternal DatabaseDetails
Glu 394Lys 394conflict
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains22
Total formula weight477312.2
Non-Polymers*Number of molecules11
Total formula weight1031.9
All*Total formula weight478344.0
*Water molecules are not included.

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PDB entries from 2024-10-30

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