6Y5D
Structure of human cGAS (K394E) bound to the nucleosome
Entity
Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
1 | A, E, M, Q (A, E, M, Q) | Histone H3.2 | polymer | 98 | 11456.3 | 4 | UniProt (Q71DI3) Pfam (PF00125) | Homo sapiens (Human) | Histone H3/m,Histone H3/o |
2 | B, F, N, R (B, F, N, R) | Histone H4 | polymer | 103 | 11394.4 | 4 | UniProt (P62805) Pfam (PF15511) | Homo sapiens (Human) | |
3 | C, G, O, S (C, G, O, S) | Histone H2A type 2-A | polymer | 130 | 14125.5 | 4 | UniProt (Q6FI13) Pfam (PF00125) Pfam (PF16211) | Homo sapiens (Human) | Histone H2A.2,Histone H2A/o |
4 | D, H, P, T (D, H, P, T) | Histone H2B type 1-K | polymer | 126 | 13921.2 | 4 | UniProt (O60814) Pfam (PF00125) | Homo sapiens (Human) | H2B K,HIRA-interacting protein 1 |
5 | I, U (I, U) | DNA (153-MER) | polymer | 153 | 46998.9 | 2 | Homo sapiens | ||
6 | J, V (J, V) | DNA (153-MER) | polymer | 153 | 47457.2 | 2 | Homo sapiens | ||
7 | K, L (K, L) | Cyclic GMP-AMP synthase | polymer | 362 | 42404.8 | 2 | UniProt (Q8N884) Pfam (PF03281) Pfam (PF20266) | Homo sapiens (Human) | h-cGAS,2'3'-cGAMP synthase,Mab-21 domain-containing protein 1 |
8 | AA, DA, EA, FA, GA... (H, M, O, S, A...) | PENTANEDIAL | non-polymer | 100.1 | 9 | Chemie (PTD) | |||
9 | BA, CA (K, L) | ZINC ION | non-polymer | 65.4 | 2 | Chemie (ZN) |
Sequence modifications
A, E, M, Q: 39 - 136 (UniProt: Q71DI3)
K, L: 161 - 522 (UniProt: Q8N884)
PDB | External Database | Details |
---|---|---|
Ala 111 | Cys 111 | conflict |
PDB | External Database | Details |
---|---|---|
Glu 394 | Lys 394 | conflict |
Sequence viewer
Contents of the asymmetric unit
Polymers | Number of chains | 22 |
Total formula weight | 477312.2 | |
Non-Polymers* | Number of molecules | 11 |
Total formula weight | 1031.9 | |
All* | Total formula weight | 478344.0 |