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6Y3E

Scaffold-ligand complex with ligand unmodelled

Replaces:  5NWO
Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1A
(A)
Peptidyl-prolyl cis-trans isomerase F, mitochondrialpolymer16517783.31UniProt (P30405)
Pfam (PF00160)
Homo sapiens (Human)PPIase F,Cyclophilin D,CypD,Cyclophilin F,Mitochondrial cyclophilin,CyP-M,Rotamase F
2B, C, D, E, F
(A)
1,2-ETHANEDIOLnon-polymer62.15Chemie (EDO)
3G, H
(A)
DODECAETHYLENE GLYCOLnon-polymer546.62Chemie (12P)
4I
(A)
PHOSPHATE IONnon-polymer95.01Chemie (PO4)
5J, K, L
(A)
SODIUM IONnon-polymer23.03Chemie (NA)
6M
(A)
waterwater18.0190Chemie (HOH)
Sequence modifications
A: 2 - 165 (UniProt: P30405)
PDBExternal DatabaseDetails
Met 1-initiating methionine
Ile 133Lys 175conflict
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains1
Total formula weight17783.3
Non-Polymers*Number of molecules11
Total formula weight1567.6
All*Total formula weight19350.9
*Water molecules are not included.

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PDB entries from 2025-07-23

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