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6Y3E

Scaffold-ligand complex with ligand unmodelled

Replaces:  5NWO
Functional Information from GO Data
ChainGOidnamespacecontents
A0000413biological_processprotein peptidyl-prolyl isomerization
A0003755molecular_functionpeptidyl-prolyl cis-trans isomerase activity
A0006457biological_processprotein folding
Functional Information from PDB Data
site_idAC1
Number of Residues3
Detailsbinding site for residue EDO A 201
ChainResidue
AASN13
ALYS15
ALYS154

site_idAC2
Number of Residues6
Detailsbinding site for residue EDO A 202
ChainResidue
AGLN163
ASER165
AEDO203
AHOH302
AHOH377
AHOH419

site_idAC3
Number of Residues2
Detailsbinding site for residue EDO A 203
ChainResidue
AGLN163
AEDO202

site_idAC4
Number of Residues5
Detailsbinding site for residue EDO A 204
ChainResidue
AARG19
AGLU134
ALEU164
AHOH395
AHOH412

site_idAC5
Number of Residues7
Detailsbinding site for residue EDO A 205
ChainResidue
ALYS31
AGLU134
AGLY135
AASP137
AHOH305
AHOH356
AHOH369

site_idAC6
Number of Residues7
Detailsbinding site for residue 12P A 206
ChainResidue
AILE78
AVAL93
APRO95
AHIS131
AHOH337
AHOH387
AHOH407

site_idAC7
Number of Residues2
Detailsbinding site for residue 12P A 207
ChainResidue
AGLY50
ALYS155

site_idAC8
Number of Residues5
Detailsbinding site for residue PO4 A 208
ChainResidue
ASER147
ALYS148
AHOH304
AHOH319
AHOH321

site_idAC9
Number of Residues1
Detailsbinding site for residue NA A 209
ChainResidue
AHOH426

site_idAD1
Number of Residues5
Detailsbinding site for residue NA A 211
ChainResidue
AGLY80
ASER81
AHOH320
AHOH359
AHOH414

Functional Information from PROSITE/UniProt
site_idPS00170
Number of Residues18
DetailsCSA_PPIASE_1 Cyclophilin-type peptidyl-prolyl cis-trans isomerase signature. YkgStFHRVIpsFMcQAG
ChainResidueDetails
ATYR48-GLY65

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues156
DetailsDomain: {"description":"PPIase cyclophilin-type","evidences":[{"source":"PROSITE-ProRule","id":"PRU00156","evidenceCode":"ECO:0000255"}]}
ChainResidueDetails

site_idSWS_FT_FI2
Number of Residues1
DetailsModified residue: {"description":"N6-succinyllysine; alternate","evidences":[{"source":"UniProtKB","id":"Q99KR7","evidenceCode":"ECO:0000250"}]}
ChainResidueDetails

site_idSWS_FT_FI3
Number of Residues3
DetailsModified residue: {"description":"N6-succinyllysine","evidences":[{"source":"UniProtKB","id":"Q99KR7","evidenceCode":"ECO:0000250"}]}
ChainResidueDetails

site_idSWS_FT_FI4
Number of Residues1
DetailsModified residue: {"description":"N6-acetyllysine","evidences":[{"source":"UniProtKB","id":"Q99KR7","evidenceCode":"ECO:0000250"}]}
ChainResidueDetails

site_idSWS_FT_FI5
Number of Residues1
DetailsModified residue: {"description":"S-nitrosocysteine","evidences":[{"source":"UniProtKB","id":"Q99KR7","evidenceCode":"ECO:0000250"}]}
ChainResidueDetails

239149

PDB entries from 2025-07-23

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