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6Y1X

X-ray structure of the radical SAM protein NifB, a key nitrogenase maturating enzyme

Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1A, B
(A, B)
Radical SAM domain proteinpolymer30935294.92UniProt (A0B690)
Pfam (PF04055)
Methanothrix thermoacetophila (strain DSM 6194 / JCM 14653 / NBRC 101360 / PT)
2C, D, K, L
(A, B)
IRON/SULFUR CLUSTERnon-polymer351.64Chemie (SF4)
3E, F, H, I, J
(A, B)
SULFATE IONnon-polymer96.15Chemie (SO4)
4G, M
(A, B)
CHLORIDE IONnon-polymer35.52Chemie (CL)
5N, O
(A, B)
waterwater18.0397Chemie (HOH)
Sequence modifications
A, B: 2 - 299 (UniProt: A0B690)
PDBExternal DatabaseDetails
Met -9-initiating methionine
Gly -8-expression tag
Ser -7-expression tag
His -6-expression tag
His -5-expression tag
His -4-expression tag
His -3-expression tag
His -2-expression tag
His -1-expression tag
Ala 0-expression tag
Ser 1-expression tag
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains2
Total formula weight70589.8
Non-Polymers*Number of molecules11
Total formula weight1957.8
All*Total formula weight72547.5
*Water molecules are not included.

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PDB entries from 2025-06-25

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