6Y1X
X-ray structure of the radical SAM protein NifB, a key nitrogenase maturating enzyme
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SOLEIL BEAMLINE PROXIMA 2 |
Synchrotron site | SOLEIL |
Beamline | PROXIMA 2 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2019-09-07 |
Detector | DECTRIS EIGER X 9M |
Wavelength(s) | 1.7389 |
Spacegroup name | P 1 |
Unit cell lengths | 40.180, 48.680, 80.380 |
Unit cell angles | 78.81, 87.73, 89.94 |
Refinement procedure
Resolution | 47.754 - 1.950 |
R-factor | 0.1786 |
Rwork | 0.177 |
R-free | 0.21210 |
Structure solution method | SAD |
Data reduction software | XDS |
Data scaling software | Aimless |
Phasing software | PHASER |
Refinement software | PHENIX (1.15.2_3472) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 47.760 | 1.950 |
High resolution limit [Å] | 1.900 | 1.900 |
Number of reflections | 38738 | 952 |
<I/σ(I)> | 7 | |
Completeness [%] | 81.9 | |
Redundancy | 3.3 | |
CC(1/2) | 0.993 | 0.370 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 5.5 | 293 | PEG 3350, Bis-Tris-HCl, ammonium sulfate. |