6XW7
Crystal structure of murine norovirus P domain in complex with Nanobody NB-5829 and glycochenodeoxycholate (GCDCA)
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A, B, C, D (A, B, E, F) | Capsid protein | polymer | 309 | 33684.0 | 4 | UniProt (Q80J94) Pfam (PF08435) | Murine norovirus 1 | |
| 2 | E, F, G, H (C, D, G, H) | Nanobody NB-5829 | polymer | 123 | 13447.9 | 4 | Vicugna pacos | ||
| 3 | I, J, N, O, R... (A, E, C, D, G...) | 1,2-ETHANEDIOL | non-polymer | 62.1 | 8 | Chemie (EDO) | |||
| 4 | K, L, P, Q (A, B, E, F) | GLYCOCHENODEOXYCHOLIC ACID | non-polymer | 449.6 | 4 | Chemie (CHO) | |||
| 5 | M (B) | MAGNESIUM ION | non-polymer | 24.3 | 1 | Chemie (MG) | |||
| 6 | AA, BA, CA, V, W... (D, G, H, A, B...) | water | water | 18.0 | 899 | Chemie (HOH) |
Sequence modifications
A, B, E, F: 226 - 533 (UniProt: Q80J94)
| PDB | External Database | Details |
|---|---|---|
| Ser 225 | - | expression tag |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 8 |
| Total formula weight | 188527.4 | |
| Non-Polymers* | Number of molecules | 13 |
| Total formula weight | 2319.3 | |
| All* | Total formula weight | 190846.8 |
