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6XM8

Crystal structure of lignostilbene bound to Co-LSD4 from Sphingobium sp. strain SYK-6

Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1A
(A)
Dioxygenasepolymer48954974.01UniProt (G2IQT9)Sphingobium sp. (strain NBRC 103272 / SYK-6)LSD4
2B
(A)
COBALT (II) IONnon-polymer58.91Chemie (CO)
3C
(A)
lignostilbenenon-polymer272.31Chemie (V5P)
4D, E, F, G, H
(A)
DIMETHYL SULFOXIDEnon-polymer78.15Chemie (DMS)
5I
(A)
MAGNESIUM IONnon-polymer24.31Chemie (MG)
6J
(A)
waterwater18.0680Chemie (HOH)
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains1
Total formula weight54974.0
Non-Polymers*Number of molecules8
Total formula weight746.2
All*Total formula weight55720.2
*Water molecules are not included.

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PDB entries from 2025-12-17

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