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6WTT

Crystals Structure of the SARS-CoV-2 (COVID-19) main protease with inhibitor GC-376

Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1A, B, C
(A, B, C)
3C-like proteinasepolymer31034379.13UniProt (P0DTD1)
Pfam (PF05409)
Severe acute respiratory syndrome coronavirus 2 (2019-nCoV)
2D, K
(A, B)
(1S,2S)-2-({N-[(benzyloxy)carbonyl]-L-leucyl}amino)-1-hydroxy-3-[(3S)-2-oxopyrrolidin-3-yl]propane-1-sulfonic acidnon-polymer485.62Chemie (K36)
PubChem (77987125)
PubChem (71481120)
PubChem (131704476)
PubChem (118737648)
PubChem (172472623)
PubChem (131704478)
PubChem (137348969)
PubChem (137349627)
PubChem (138734767)
PubChem (156198974)
PubChem (162651992)
PubChem (163337713)
PubChem (169544973)
3E
(A)
DI(HYDROXYETHYL)ETHERnon-polymer106.11Chemie (PEG)
PubChem (8117)
4F
(A)
GLYCEROLnon-polymer92.11Chemie (GOL)
PubChem (753)
5G, H, I, L, O
(A, B, C)
CHLORIDE IONnon-polymer35.55Chemie (CL)
PubChem (312)
6J, M
(A, B)
MAGNESIUM IONnon-polymer24.32Chemie (MG)
PubChem (888)
7N
(C)
(1R,2S)-2-({N-[(benzyloxy)carbonyl]-L-leucyl}amino)-1-hydroxy-3-[(3S)-2-oxopyrrolidin-3-yl]propane-1-sulfonic acidnon-polymer485.61Chemie (B1S)
8P, Q, R
(A, B, C)
waterwater18.0327Chemie (HOH)
Sequence modifications
A, B, C: 1 - 304 (UniProt: P0DTD1)
PDBExternal DatabaseDetails
His 305-expression tag
His 306-expression tag
His 307-expression tag
His 308-expression tag
His 309-expression tag
His 310-expression tag
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains3
Total formula weight103137.4
Non-Polymers*Number of molecules12
Total formula weight1880.7
All*Total formula weight105018.1
*Water molecules are not included.

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PDB entries from 2026-05-06

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