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6WOH

Diphosphoinositol polyphosphate phosphohydrolase 1 (DIPP1/NUDT3) in complex with 1,5-di-methylenebisphosphonate inositol tetrakisphosphate (1,5-PCP-IP4)

Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1A
(A)
Diphosphoinositol polyphosphate phosphohydrolase 1polymer16919542.91UniProt (O95989)
Pfam (PF00293)
Homo sapiens (Human)DIPP-1,Diadenosine 5',5'''-P1,P6-hexaphosphate hydrolase 1,Nucleoside diphosphate-linked moiety X motif 3,Nudix motif 3
2B
(A)
{[(1R,3S,4S,5R,6S)-2,4,5,6-tetrakis(phosphonooxy)cyclohexane-1,3-diyl]bis[oxy(hydroxyphosphoryl)methanediyl]}bis(phosphonic acid)non-polymer816.01Chemie (4WZ)
3C, D
(A)
SULFATE IONnon-polymer96.12Chemie (SO4)
4E
(A)
waterwater18.0110Chemie (HOH)
Sequence modifications
A: 1 - 148 (UniProt: O95989)
PDBExternal DatabaseDetails
His -20-expression tag
His -19-expression tag
His -18-expression tag
His -17-expression tag
His -16-expression tag
His -15-expression tag
Ser -14-expression tag
Ser -13-expression tag
Gly -12-expression tag
Val -11-expression tag
Asp -10-expression tag
Leu -9-expression tag
Gly -8-expression tag
Thr -7-expression tag
Glu -6-expression tag
Asn -5-expression tag
Leu -4-expression tag
Tyr -3-expression tag
Phe -2-expression tag
Gln -1-expression tag
Ser 0-expression tag
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains1
Total formula weight19542.9
Non-Polymers*Number of molecules3
Total formula weight1008.2
All*Total formula weight20551.1
*Water molecules are not included.

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PDB entries from 2026-01-14

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