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6WOA

Diphosphoinositol polyphosphate phosphohydrolase 1 (DIPP1/NUDT3) in complex with 2-Diphosphoinositol pentakisphosphate (2-IP7), Mg, and Fluoride ion

Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1A
(A)
Diphosphoinositol polyphosphate phosphohydrolase 1polymer16919542.91UniProt (O95989)
Pfam (PF00293)
Homo sapiens (Human)DIPP-1,Diadenosine 5',5'''-P1,P6-hexaphosphate hydrolase 1,Nucleoside diphosphate-linked moiety X motif 3,Nudix motif 3
2B
(A)
(1s,2R,3S,4s,5R,6S)-2,3,4,5,6-pentakis(phosphonooxy)cyclohexyl trihydrogen diphosphatenon-polymer740.01Chemie (UEV)
3C, D, E
(A)
MAGNESIUM IONnon-polymer24.33Chemie (MG)
4F
(A)
CHLORIDE IONnon-polymer35.51Chemie (CL)
5G
(A)
SULFATE IONnon-polymer96.11Chemie (SO4)
6H
(A)
FLUORIDE IONnon-polymer19.01Chemie (F)
7I
(A)
waterwater18.0145Chemie (HOH)
Sequence modifications
A: 1 - 148 (UniProt: O95989)
PDBExternal DatabaseDetails
His -20-expression tag
His -19-expression tag
His -18-expression tag
His -17-expression tag
His -16-expression tag
His -15-expression tag
Ser -14-expression tag
Ser -13-expression tag
Gly -12-expression tag
Val -11-expression tag
Asp -10-expression tag
Leu -9-expression tag
Gly -8-expression tag
Thr -7-expression tag
Glu -6-expression tag
Asn -5-expression tag
Leu -4-expression tag
Tyr -3-expression tag
Phe -2-expression tag
Gln -1-expression tag
Ser 0-expression tag
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains1
Total formula weight19542.9
Non-Polymers*Number of molecules7
Total formula weight963.4
All*Total formula weight20506.4
*Water molecules are not included.

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PDB entries from 2024-10-30

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