6WN6
Crystal structure of 3-keto-D-glucoside 4-epimerase, YcjR, from E. coli, apo form
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A, B, C, D (A, B, C, D) | 3-keto-D-glucoside 4-epimerase | polymer | 314 | 35571.1 | 4 | UniProt (A0A5E8GIH3) Pfam (PF01261) UniProt (by SIFTS) (P76044) | Escherichia coli | Transient receptor potential locus |
| 2 | DB, E, KA, U (D, A, C, B) | MANGANESE (II) ION | non-polymer | 54.9 | 4 | Chemie (MN) | |||
| 3 | AA, AB, BA, BB, CA... (B, C, D, A) | 1,2-ETHANEDIOL | non-polymer | 62.1 | 64 | Chemie (EDO) | |||
| 4 | UB, VB, WB, XB (A, B, C, D) | water | water | 18.0 | 419 | Chemie (HOH) |
Sequence modifications
A, B, C, D: 2 - 265 (UniProt: A0A5E8GIH3)
| PDB | External Database | Details |
|---|---|---|
| Met -48 | - | initiating methionine |
| His -47 | - | expression tag |
| His -46 | - | expression tag |
| His -45 | - | expression tag |
| His -44 | - | expression tag |
| His -43 | - | expression tag |
| His -42 | - | expression tag |
| Ser -41 | - | expression tag |
| Ser -40 | - | expression tag |
| Gly -39 | - | expression tag |
| Leu -38 | - | expression tag |
| Val -37 | - | expression tag |
| Pro -36 | - | expression tag |
| Arg -35 | - | expression tag |
| Gly -34 | - | expression tag |
| Ser -33 | - | expression tag |
| Gly -32 | - | expression tag |
| Met -31 | - | expression tag |
| Lys -30 | - | expression tag |
| Glu -29 | - | expression tag |
| Thr -28 | - | expression tag |
| Ala -27 | - | expression tag |
| Ala -26 | - | expression tag |
| Ala -25 | - | expression tag |
| Lys -24 | - | expression tag |
| Phe -23 | - | expression tag |
| Glu -22 | - | expression tag |
| Arg -21 | - | expression tag |
| Gln -20 | - | expression tag |
| His -19 | - | expression tag |
| Met -18 | - | expression tag |
| Asp -17 | - | expression tag |
| Ser -16 | - | expression tag |
| Pro -15 | - | expression tag |
| Asp -14 | - | expression tag |
| Leu -13 | - | expression tag |
| Gly -12 | - | expression tag |
| Thr -11 | - | expression tag |
| Asp -10 | - | expression tag |
| Asp -9 | - | expression tag |
| Asp -8 | - | expression tag |
| Asp -7 | - | expression tag |
| Lys -6 | - | expression tag |
| Ala -5 | - | expression tag |
| Met -4 | - | expression tag |
| Ala -3 | - | expression tag |
| Asp -2 | - | expression tag |
| Ile -1 | - | expression tag |
| Gly 0 | - | expression tag |
| Ser 1 | - | expression tag |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 4 |
| Total formula weight | 142284.4 | |
| Non-Polymers* | Number of molecules | 68 |
| Total formula weight | 4192.1 | |
| All* | Total formula weight | 146476.5 |
