6WIX
Crystal Structure of HIV-1 MI369 RnS-DS.SOSIP Prefusion Env Trimer in Complex with Human Antibodies 3H109L and 35O22 at 3.5 Angstrom
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A (B) | Envelope glycoprotein gp41 | polymer | 153 | 17211.6 | 1 | Pfam (PF00517) UniProt (by SIFTS) (O55774) | Human immunodeficiency virus 1 | |
| 2 | B (D) | 35O22 scFv heavy chain | polymer | 134 | 14663.3 | 1 | Homo sapiens (Human) | ||
| 3 | C (E) | 35O22 scFv light chain | polymer | 114 | 12358.6 | 1 | Homo sapiens (Human) | ||
| 4 | D (G) | Envelope glycoprotein gp120 | polymer | 498 | 56106.3 | 1 | Pfam (PF00516) UniProt (by SIFTS) (Q0H5Z3) | Human immunodeficiency virus 1 | |
| 5 | E (H) | 3H109L Fab heavy chain | polymer | 244 | 26255.5 | 1 | Homo sapiens (Human) | ||
| 6 | F (L) | 3H109L Fab light chain | polymer | 217 | 23416.1 | 1 | Homo sapiens (Human) | ||
| 7 | G (A) | alpha-D-mannopyranose-(1-3)-alpha-D-mannopyranose-(1-6)-[alpha-D-mannopyranose-(1-3)]beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose | branched | 1073.0 | 1 | In PDB GlyTouCan (G09724ZC) | |||
| 8 | H, I, K, M, P (C, F, J, M, P) | 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose | branched | 424.4 | 5 | In PDB GlyTouCan (G42666HT) | |||
| 9 | J, O (I, O) | beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose | branched | 586.5 | 2 | In PDB GlyTouCan (G15407YE) | |||
| 10 | L (K) | alpha-D-mannopyranose-(1-2)-alpha-D-mannopyranose-(1-2)-alpha-D-mannopyranose-(1-3)-[alpha-D-mannopyranose-(1-2)-alpha-D-mannopyranose-(1-6)-[alpha-D-mannopyranose-(1-3)]alpha-D-mannopyranose-(1-6)]beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose | branched | 1721.5 | 1 | In PDB GlyTouCan (G40702WU) | |||
| 11 | N (N) | 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose | branched | 627.6 | 1 | In PDB GlyTouCan (G47362BJ) | triacetyl-beta-chitotriose | ||
| 12 | Q, R, S, T (G) | 2-acetamido-2-deoxy-beta-D-glucopyranose | non-polymer | 221.2 | 4 | Chemie (NAG) |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 6 |
| Total formula weight | 150011.5 | |
| Branched | Number of molecules | 10 |
| Total formula weight | 6717.2 | |
| Non-Polymers* | Number of molecules | 4 |
| Total formula weight | 884.8 | |
| All* | Total formula weight | 157613.5 |
