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6WFJ

Crystal structures of human E-NPP 1: apo

This is a non-PDB format compatible entry.
Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1A, B
(AcA, BcB)
Ectonucleotide pyrophosphatase/phosphodiesterase family member 1polymer925105137.42UniProt (P22413)
Pfam (PF01033)
Pfam (PF01663)
Pfam (PF01223)
Homo sapiens (Human)E-NPP 1,Membrane component chromosome 6 surface marker 1,Phosphodiesterase I/nucleotide pyrophosphatase 1,Plasma-cell membrane glycoprotein PC-1
2C
(AeA)
beta-D-mannopyranose-(1-3)-beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranosebranched748.71In PDB
GlyTouCan (G31886NL)
3D
(AiA)
alpha-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranosebranched586.51In PDB
GlyTouCan (G62182OO)
4E, G
(AmA, BgB)
2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranosebranched424.42In PDB
GlyTouCan (G42666HT)
5F
(BdB)
beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranosebranched586.51In PDB
GlyTouCan (G15407YE)
6H, I, Q, R
(AcA, BcB)
ZINC IONnon-polymer65.44Chemie (ZN)
7J, S
(AcA, BcB)
CALCIUM IONnon-polymer40.12Chemie (CA)
PubChem (271)
8K, L, T, U
(AcA, BcB)
2-acetamido-2-deoxy-beta-D-glucopyranosenon-polymer221.24Chemie (NAG)
9M, V
(AcA, BcB)
ADENOSINE MONOPHOSPHATEnon-polymer347.22Chemie (AMP)
PubChem (16397049)
PubChem (16760266)
PubChem (224)
PubChem (40467049)
PubChem (40469468)
PubChem (34768)
PubChem (44348067)
PubChem (83862)
PubChem (45358029)
PubChem (46874558)
PubChem (40459109)
PubChem (57358045)
PubChem (57879893)
PubChem (57879902)
PubChem (46875232)
PubChem (446048)
PubChem (515384)
PubChem (638042)
PubChem (177678969)
PubChem (6083)
PubChem (1549371)
PubChem (5316444)
PubChem (92144436)
PubChem (5742864)
PubChem (122197642)
PubChem (12358354)
PubChem (12163610)
PubChem (12358355)
PubChem (162290139)
PubChem (162946266)
PubChem (171699505)
10N
(AcA)
DI(HYDROXYETHYL)ETHERnon-polymer106.11Chemie (PEG)
PubChem (8117)
11O, P, W
(AcA, BcB)
1,2-ETHANEDIOLnon-polymer62.13Chemie (EDO)
12X, Y
(AcA, BcB)
waterwater18.0214Chemie (HOH)
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains2
Total formula weight210274.8
BranchedNumber of molecules5
Total formula weight2770.6
Non-Polymers*Number of molecules16
Total formula weight2213.4
All*Total formula weight215258.7
*Water molecules are not included.

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PDB entries from 2026-05-13

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