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6WDU

The external aldimine form of the Salmonella thypi wild-type tryptophan synthase in open conformation showing multiple side chain conformations for the residue beta Q114 and sodium ion at the metal coordination site. One of the beta-Q114 rotamer conformations allows a hydrogen bond to form with the PLP oxygen at the position 3 in the ring.

Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1A
(A)
Tryptophan synthase alpha chainpolymer26828698.81UniProt (P00929)
Pfam (PF00290)
Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
2B
(B)
Tryptophan synthase beta chainpolymer39742918.91UniProt (P0A2K1)
Pfam (PF00291)
Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
3C, D, E, J, K...
(A, B)
1,2-ETHANEDIOLnon-polymer62.18Chemie (EDO)
4AA, BA, CA, F, G...
(B, A)
DIMETHYL SULFOXIDEnon-polymer78.114Chemie (DMS)
5I, L
(B)
DI(HYDROXYETHYL)ETHERnon-polymer106.12Chemie (PEG)
6O, P
(B)
SODIUM IONnon-polymer23.02Chemie (NA)
7R
(B)
(E)-N-({3-hydroxy-2-methyl-5-[(phosphonooxy)methyl]pyridin-4-yl}methylidene)-L-serinenon-polymer334.21Chemie (KOU)
8DA, EA
(A, B)
waterwater18.0753Chemie (HOH)
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains2
Total formula weight71617.7
Non-Polymers*Number of molecules27
Total formula weight2182.8
All*Total formula weight73800.5
*Water molecules are not included.

246031

PDB entries from 2025-12-10

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