6WAR
Crystal structure of the MERS-CoV RBD bound by the neutralizing single-domain antibody MERS VHH-55
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A, C, E, G, I... (A, C, E, G, I...) | Spike protein | polymer | 231 | 25337.5 | 8 | UniProt (A0A0U2MS80) Pfam (PF09408) UniProt (by SIFTS) (K9N5Q8) | Middle East respiratory syndrome-related coronavirus (MERS-CoV) | |
| 2 | B, D, F, H, J... (B, D, F, H, J...) | nanobody MERS VHH-55 | polymer | 128 | 13684.1 | 8 | Lama glama | ||
| 3 | Q, R, S (E, G, O) | 2-acetamido-2-deoxy-beta-D-glucopyranose | non-polymer | 221.2 | 3 | Chemie (NAG) |
Sequence modifications
A, C, E, G, I, K, M, O: 367 - 589 (UniProt: A0A0U2MS80)
| PDB | External Database | Details |
|---|---|---|
| Phe 506 | Leu 506 | conflict |
| Gly 590 | - | expression tag |
| Ser 591 | - | expression tag |
| Leu 592 | - | expression tag |
| Glu 593 | - | expression tag |
| Val 594 | - | expression tag |
| Leu 595 | - | expression tag |
| Phe 596 | - | expression tag |
| Gln 597 | - | expression tag |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 16 |
| Total formula weight | 312173.1 | |
| Non-Polymers* | Number of molecules | 3 |
| Total formula weight | 663.6 | |
| All* | Total formula weight | 312836.7 |
