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6W8H

H-PGDS complexed with inhibitor 1Y

Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1A, B
(A, C)
Hematopoietic prostaglandin D synthasepolymer21325182.82UniProt (O60760)
Pfam (PF02798)
Pfam (PF14497)
Homo sapiens (Human)H-PGDS,GST class-sigma,Glutathione S-transferase,Glutathione-dependent PGD synthase,Glutathione-requiring prostaglandin D synthase,Prostaglandin-H2 D-isomerase
2C, F
(A, C)
GLUTATHIONEnon-polymer307.32Chemie (GSH)
3D
(A)
1,2-ETHANEDIOLnon-polymer62.11Chemie (EDO)
4E, G
(A, C)
7-cyclopropyl-N-[trans-4-(2-hydroxypropan-2-yl)cyclohexyl]-1,8-naphthyridine-3-carboxamidenon-polymer353.52Chemie (TJG)
5H, I
(A, C)
waterwater18.0102Chemie (HOH)
Sequence modifications
A, C: 1 - 199 (UniProt: O60760)
PDBExternal DatabaseDetails
Met -13-initiating methionine
His -12-expression tag
His -11-expression tag
His -10-expression tag
His -9-expression tag
His -8-expression tag
His -7-expression tag
Glu -6-expression tag
Asn -5-expression tag
Leu -4-expression tag
Tyr -3-expression tag
Phe -2-expression tag
Gln -1-expression tag
Gly 0-expression tag
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains2
Total formula weight50365.6
Non-Polymers*Number of molecules5
Total formula weight1383.6
All*Total formula weight51749.3
*Water molecules are not included.

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PDB entries from 2025-06-11

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