6W4N

Co-crystal structure of Pd_dinase with probe glycine-propargylglycine-AOMK

Entity

Entity ID	Chain ID	Description	Type	Chain length	Formula weight	Number of molecules	DB Name (Accession)	Biological source	Descriptive keywords
1	A, B, C, D, E...	Aminopeptidase	polymer	401	45895.4	6	UniProt (A0A395YY96) Pfam (PF03051) UniProt (by SIFTS) (A6LE66) In PDB	Parabacteroides distasonis
2	A, B, C, D, E...	2-azanyl-~{N}-[(3~{S})-2-oxidanylidenehex-5-yn-3-yl]ethanamide	non-polymer		168.2	6	Chemie (SWJ)
3	A, B, C, D, E...	POTASSIUM ION	non-polymer		39.1	12	Chemie (K)
4		water	water		18.0	561	Chemie (HOH)

Sequence modifications

A, B, C, D, E, F: 23 - 405 (UniProt: A0A395YY96)

PDB	External Database	Details
Met 5	-	initiating methionine
Gly 6	-	expression tag
Ser 7	-	expression tag
Asp 8	-	expression tag
Lys 9	-	expression tag
Ile 10	-	expression tag
His 11	-	expression tag
His 12	-	expression tag
His 13	-	expression tag
His 14	-	expression tag
His 15	-	expression tag
His 16	-	expression tag
Glu 17	-	expression tag
Asn 18	-	expression tag
Leu 19	-	expression tag
Tyr 20	-	expression tag
Phe 21	-	expression tag
Gln 22	-	expression tag

Contents of the asymmetric unit

Polymers	Number of chains	6
	Total formula weight	275372.2
Non-Polymers*	Number of molecules	18
	Total formula weight	1478.3
All*	Total formula weight	276850.5

*Water molecules are not included.