6W2M
Abortive ternary complex crystal structure of DNA polymerase Beta with 8OG-dC base pair at the primer terminus and flipped out dA
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A (A) | DNA polymerase beta | polymer | 335 | 38241.7 | 1 | UniProt (P06746) Pfam (PF14716) Pfam (PF10391) Pfam (PF14792) Pfam (PF14791) | Homo sapiens (Human) | |
| 2 | B (T) | Template Strand | polymer | 16 | 4885.2 | 1 | synthetic construct | ||
| 3 | C (P) | Primer Strand | polymer | 11 | 3374.2 | 1 | synthetic construct | ||
| 4 | D (D) | Downstream Primer Strand | polymer | 5 | 1536.0 | 1 | synthetic construct | ||
| 5 | E, F (A) | MAGNESIUM ION | non-polymer | 24.3 | 2 | Chemie (MG) | |||
| 6 | G, H (A) | SODIUM ION | non-polymer | 23.0 | 2 | Chemie (NA) | |||
| 7 | I, J (A) | CHLORIDE ION | non-polymer | 35.5 | 2 | Chemie (CL) | |||
| 8 | K (A) | [[[(2~{R},3~{S},5~{R})-5-(4-azanyl-2-oxidanylidene-pyrimidin-1-yl)-3-oxidanyl-oxolan-2-yl]methoxy-oxidanyl-phosphoryl]oxy-oxidanyl-phosphoryl]methylphosphonic acid | non-polymer | 465.2 | 1 | Chemie (SFV) | |||
| 9 | L, M, N, O (A, T, P, D) | water | water | 18.0 | 446 | Chemie (HOH) |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 4 |
| Total formula weight | 48037.1 | |
| Non-Polymers* | Number of molecules | 7 |
| Total formula weight | 630.7 | |
| All* | Total formula weight | 48667.8 |
