6VAT
Structure of the periplasmic domain of YejM from Salmonella typhimurium
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A, B, C, D, E... (A, B, C, D, E...) | Periplasmic domain of the cardiolipin transporter protein YejM/PbgA | polymer | 368 | 41173.8 | 6 | UniProt (A0A4V1IDU5) Pfam (PF00884) UniProt (by SIFTS) (P40709) | Salmonella enterica subsp. enterica serovar | |
| 2 | DA, G, H, M, Q... (E, A, B, C, D) | TETRAETHYLENE GLYCOL | non-polymer | 194.2 | 7 | Chemie (PG4) | |||
| 3 | I, T, Z (A, C, D) | ETHANOLAMINE | non-polymer | 61.1 | 3 | Chemie (ETA) | |||
| 4 | AA, J, U (D, A, C) | DI(HYDROXYETHYL)ETHER | non-polymer | 106.1 | 3 | Chemie (PEG) | |||
| 5 | EA, HA, K, V (E, F, A, C) | PENTAETHYLENE GLYCOL | non-polymer | 238.3 | 4 | Chemie (1PE) | |||
| 6 | CA, IA, L, O, W (D, F, A, B, C) | MAGNESIUM ION | non-polymer | 24.3 | 5 | Chemie (MG) | |||
| 7 | GA, N, S (F, B, C) | TRIETHYLENE GLYCOL | non-polymer | 150.2 | 3 | Chemie (PGE) | |||
| 8 | FA, P, X (E, B, C) | CALCIUM ION | non-polymer | 40.1 | 3 | Chemie (CA) | |||
| 9 | BA (D) | HEXAETHYLENE GLYCOL | non-polymer | 282.3 | 1 | Chemie (P6G) | |||
| 10 | JA, KA, LA, MA, NA... (A, B, C, D, E...) | water | water | 18.0 | 687 | Chemie (HOH) |
Sequence modifications
A, B, C, D, E, F: 241 - 586 (UniProt: A0A4V1IDU5)
| PDB | External Database | Details |
|---|---|---|
| Met 219 | - | expression tag |
| Ser 220 | - | expression tag |
| Gly 221 | - | expression tag |
| His 222 | - | expression tag |
| His 223 | - | expression tag |
| His 224 | - | expression tag |
| His 225 | - | expression tag |
| His 226 | - | expression tag |
| His 227 | - | expression tag |
| Ser 228 | - | expression tag |
| Ser 229 | - | expression tag |
| Gly 230 | - | expression tag |
| Leu 231 | - | expression tag |
| Val 232 | - | expression tag |
| Pro 233 | - | expression tag |
| Arg 234 | - | expression tag |
| Gly 235 | - | expression tag |
| Ser 236 | - | expression tag |
| His 237 | - | expression tag |
| Met 238 | - | expression tag |
| Ala 239 | - | expression tag |
| Ser 240 | - | expression tag |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 6 |
| Total formula weight | 247042.8 | |
| Non-Polymers* | Number of molecules | 29 |
| Total formula weight | 3788.9 | |
| All* | Total formula weight | 250831.7 |
