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6VAT

Structure of the periplasmic domain of YejM from Salmonella typhimurium

Functional Information from GO Data
ChainGOidnamespacecontents
A0003824molecular_functioncatalytic activity
A0008484molecular_functionsulfuric ester hydrolase activity
B0003824molecular_functioncatalytic activity
B0008484molecular_functionsulfuric ester hydrolase activity
C0003824molecular_functioncatalytic activity
C0008484molecular_functionsulfuric ester hydrolase activity
D0003824molecular_functioncatalytic activity
D0008484molecular_functionsulfuric ester hydrolase activity
E0003824molecular_functioncatalytic activity
E0008484molecular_functionsulfuric ester hydrolase activity
F0003824molecular_functioncatalytic activity
F0008484molecular_functionsulfuric ester hydrolase activity
Functional Information from PDB Data
site_idAC1
Number of Residues4
Detailsbinding site for residue PG4 A 601
ChainResidue
ATRP477
AARG501
AHOH702
BPG4601

site_idAC2
Number of Residues3
Detailsbinding site for residue ETA A 603
ChainResidue
AASN300
AHIS468
AHOH770

site_idAC3
Number of Residues4
Detailsbinding site for residue PEG A 604
ChainResidue
AGLU436
AHOH754
AGLY384
AALA433

site_idAC4
Number of Residues6
Detailsbinding site for residue 1PE A 605
ChainResidue
ASER314
ASER534
ATHR535
AASN549
AGLU580
ALYS581

site_idAC5
Number of Residues2
Detailsbinding site for residue MG A 606
ChainResidue
ATHR302
AARG451

site_idAC6
Number of Residues5
Detailsbinding site for residue PG4 B 601
ChainResidue
APG4601
BTRP477
BTHR480
BARG501
BPHE519

site_idAC7
Number of Residues6
Detailsbinding site for residue PGE B 602
ChainResidue
BSER314
BGLY316
BSER534
BASN549
BGLU580
BLYS581

site_idAC8
Number of Residues4
Detailsbinding site for residue MG B 603
ChainResidue
BTHR301
BTHR302
BARG451
BHOH826

site_idAC9
Number of Residues2
Detailsbinding site for residue CA B 604
ChainResidue
ATYR553
BTYR553

site_idAD1
Number of Residues6
Detailsbinding site for residue PG4 C 601
ChainResidue
CTRP477
CTHR480
CARG501
CPHE519
CPG4602
E1PE602

site_idAD2
Number of Residues6
Detailsbinding site for residue PG4 C 602
ChainResidue
CTHR258
CGLN500
CARG501
CHIS504
CPG4601
E1PE602

site_idAD3
Number of Residues6
Detailsbinding site for residue PGE C 603
ChainResidue
CASN300
CARG451
CASP463
CHIS468
CETA604
CHOH792

site_idAD4
Number of Residues4
Detailsbinding site for residue ETA C 604
ChainResidue
CARG451
CILE453
CPGE603
CHOH761

site_idAD5
Number of Residues5
Detailsbinding site for residue PEG C 605
ChainResidue
CPHE462
CASP463
CTRP464
CVAL546
CHOH806

site_idAD6
Number of Residues2
Detailsbinding site for residue MG C 607
ChainResidue
CTHR302
CARG451

site_idAD7
Number of Residues1
Detailsbinding site for residue CA C 608
ChainResidue
CTYR553

site_idAD8
Number of Residues6
Detailsbinding site for residue PG4 D 601
ChainResidue
DSER314
DTYR317
DASN549
DGLU580
DLYS581
DHOH725

site_idAD9
Number of Residues4
Detailsbinding site for residue ETA D 602
ChainResidue
DGLN409
DPRO454
DASN460
DHOH740

site_idAE1
Number of Residues2
Detailsbinding site for residue PEG D 603
ChainResidue
CLEU574
DHOH721

site_idAE2
Number of Residues6
Detailsbinding site for residue P6G D 604
ChainResidue
DTRP477
DTHR480
DARG501
DPHE519
DHOH823
F1PE702

site_idAE3
Number of Residues2
Detailsbinding site for residue MG D 605
ChainResidue
DTHR302
DARG451

site_idAE4
Number of Residues6
Detailsbinding site for residue PG4 E 601
ChainResidue
ESER314
EGLY316
ETHR535
EASN548
EGLU580
ELYS581

site_idAE5
Number of Residues6
Detailsbinding site for residue 1PE E 602
ChainResidue
CPG4601
CPG4602
ETRP477
ETHR480
EARG501
EPHE519

site_idAE6
Number of Residues1
Detailsbinding site for residue CA E 603
ChainResidue
ELEU570

site_idAE7
Number of Residues5
Detailsbinding site for residue PGE F 701
ChainResidue
FVAL242
FSER314
FGLY316
FGLU580
FILE584

site_idAE8
Number of Residues5
Detailsbinding site for residue 1PE F 702
ChainResidue
DP6G604
FTRP477
FTHR480
FARG501
FPHE519

site_idAE9
Number of Residues3
Detailsbinding site for residue MG F 703
ChainResidue
FTHR302
FARG451
FHOH840

site_idAF1
Number of Residues12
Detailsbinding site for Di-peptide 1PE C 606 and LYS C 581
ChainResidue
CSER314
CGLY316
CTYR317
CASN548
CLEU577
CTHR578
CGLU579
CGLU580
CARG582
CPHE583
CILE584
CHOH788

247536

PDB entries from 2026-01-14

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