6URM
Crystal structure of vaccine-elicited receptor-binding site targeting antibody LPAF-a.01 in complex with Hemagglutinin H1 A/California/04/2009
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | F, C | Hemagglutinin | polymer | 505 | 56648.3 | 2 | UniProt (A0A3S7XTA4) Pfam (PF00509) UniProt (by SIFTS) (C3W5S1) In PDB | Influenza A virus | |
| 2 | H, D | The heavy chain of antibody LPAF-a.01 | polymer | 227 | 24416.7 | 2 | Homo sapiens | ||
| 3 | L, E | The light chain of antibody LPAF-a.01 | polymer | 211 | 22541.1 | 2 | Homo sapiens | ||
| 4 | A | 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose | branched | 424.4 | 1 | In PDB GlyTouCan (G42666HT) | |||
| 5 | B | alpha-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose | branched | 586.5 | 1 | In PDB GlyTouCan (G62182OO) | |||
| 6 | F | 2-acetamido-2-deoxy-beta-D-glucopyranose | non-polymer | 221.2 | 1 | Chemie (NAG) | |||
| 7 | F, L, D, E | SULFATE ION | non-polymer | 96.1 | 4 | Chemie (SO4) | |||
| 8 | H, D | GLYCEROL | non-polymer | 92.1 | 2 | Chemie (GOL) | |||
| 9 | water | water | 18.0 | 99 | Chemie (HOH) |
Sequence modifications
F, C: 10 - 505 (UniProt: A0A3S7XTA4)
| PDB | External Database | Details |
|---|---|---|
| Ser 506 | - | expression tag |
| Gly 507 | - | expression tag |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 6 |
| Total formula weight | 207212.2 | |
| Branched | Number of molecules | 2 |
| Total formula weight | 1010.9 | |
| Non-Polymers* | Number of molecules | 7 |
| Total formula weight | 789.6 | |
| All* | Total formula weight | 209012.8 |
