6UO5
Crystal structure of Danio rerio histone deacetylase 6 catalytic domain 1 (CD1) Y363F mutant complexed with AR-42
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A (A) | Histone deacetylase 6 | polymer | 366 | 40278.6 | 1 | UniProt (F8W4B7) Pfam (PF00850) | Danio rerio (Zebrafish) | |
| 2 | B (A) | AR-42 | non-polymer | 312.4 | 1 | Chemie (QCP) | |||
| 3 | C (A) | 1,2-ETHANEDIOL | non-polymer | 62.1 | 1 | Chemie (EDO) | |||
| 4 | D (A) | ZINC ION | non-polymer | 65.4 | 1 | Chemie (ZN) | |||
| 5 | E, F (A) | POTASSIUM ION | non-polymer | 39.1 | 2 | Chemie (K) | |||
| 6 | G (A) | water | water | 18.0 | 262 | Chemie (HOH) |
Sequence modifications
A: 60 - 419 (UniProt: F8W4B7)
| PDB | External Database | Details |
|---|---|---|
| Ser 54 | - | expression tag |
| Asn 55 | - | expression tag |
| Ala 56 | - | expression tag |
| Gly 57 | - | expression tag |
| Gly 58 | - | expression tag |
| Ser 59 | - | expression tag |
| Phe 363 | Tyr 363 | engineered mutation |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 1 |
| Total formula weight | 40278.6 | |
| Non-Polymers* | Number of molecules | 5 |
| Total formula weight | 518.0 | |
| All* | Total formula weight | 40796.6 |
