6UBV
The structure of the Streptococcus gordonii surface protein SspB in complex with TEV peptide provides clues to the adherence of oral streptococcal adherence to salivary agglutinin
Entity
Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
1 | A, B, C, D | Surface protein adhesin | polymer | 425 | 46718.0 | 4 | UniProt (C9E3B4) Pfam (PF06696) Pfam (PF08363) UniProt (by SIFTS) (P11657) In PDB | Streptococcus mutans | |
2 | A, B, C, D | CALCIUM ION | non-polymer | 40.1 | 4 | Chemie (CA) | |||
3 | A, B, C, D | N-(3,4-dihydroxyphenyl)-N'-[2-(3,4-dihydroxyphenyl)ethyl]urea | non-polymer | 304.3 | 4 | Chemie (SNZ) | |||
4 | A, C, D | SODIUM ION | non-polymer | 23.0 | 3 | Chemie (NA) | |||
5 | B, D | SULFATE ION | non-polymer | 96.1 | 2 | Chemie (SO4) | |||
6 | B, C, D | 1,2-ETHANEDIOL | non-polymer | 62.1 | 3 | Chemie (EDO) | |||
7 | water | water | 18.0 | 380 | Chemie (HOH) |
Sequence modifications
A, B, C, D: 447 - 849 (UniProt: C9E3B4)
PDB | External Database | Details |
---|---|---|
Met 433 | - | expression tag |
Ala 434 | - | expression tag |
Ser 435 | - | expression tag |
Met 436 | - | expression tag |
Thr 437 | - | expression tag |
Gly 438 | - | expression tag |
Gly 439 | - | expression tag |
Gln 440 | - | expression tag |
Gln 441 | - | expression tag |
Met 442 | - | expression tag |
Gly 443 | - | expression tag |
Arg 444 | - | expression tag |
Ile 445 | - | expression tag |
Gln 446 | - | expression tag |
Leu 850 | - | expression tag |
Glu 851 | - | expression tag |
His 852 | - | expression tag |
His 853 | - | expression tag |
His 854 | - | expression tag |
His 855 | - | expression tag |
His 856 | - | expression tag |
His 857 | - | expression tag |
Sequence viewer
Contents of the asymmetric unit
Polymers | Number of chains | 4 |
Total formula weight | 186871.9 | |
Non-Polymers* | Number of molecules | 16 |
Total formula weight | 1824.8 | |
All* | Total formula weight | 188696.7 |