6UB5
Crystal structure (P21 form) of a GH128 (subgroup IV) endo-beta-1,3-glucanase from Lentinula edodes (LeGH128_IV) in complex with laminaritriose
Entity
Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
1 | A | Endo-beta-1,3-glucanase | polymer | 270 | 28780.8 | 1 | UniProt (G9M5R4) Pfam (PF11790) In PDB | Lentinula edodes (Shiitake mushroom) | |
2 | B | beta-D-glucopyranose-(1-3)-beta-D-glucopyranose-(1-3)-beta-D-glucopyranose | branched | 504.4 | 1 | In PDB GlyTouCan (G00024MO) | |||
3 | C | beta-D-glucopyranose-(1-3)-beta-D-glucopyranose | branched | 342.3 | 1 | In PDB BIRD (PRD_900024) GlyTouCan (G36535HU) | beta-laminaribiose | ||
4 | A | CHLORIDE ION | non-polymer | 35.5 | 1 | Chemie (CL) | |||
5 | water | water | 18.0 | 355 | Chemie (HOH) |
Sequence modifications
A: 21 - 267 (UniProt: G9M5R4)
PDB | External Database | Details |
---|---|---|
Met -2 | - | initiating methionine |
Gly -1 | - | expression tag |
Ser 0 | - | expression tag |
Ser 1 | - | expression tag |
His 2 | - | expression tag |
His 3 | - | expression tag |
His 4 | - | expression tag |
His 5 | - | expression tag |
His 6 | - | expression tag |
His 7 | - | expression tag |
Ser 8 | - | expression tag |
Ser 9 | - | expression tag |
Gly 10 | - | expression tag |
Leu 11 | - | expression tag |
Val 12 | - | expression tag |
Pro 13 | - | expression tag |
Arg 14 | - | expression tag |
Gly 15 | - | expression tag |
Ser 16 | - | expression tag |
His 17 | - | expression tag |
Met 18 | - | expression tag |
Ala 19 | - | expression tag |
Ser 20 | - | expression tag |
Sequence viewer
Contents of the asymmetric unit
Polymers | Number of chains | 1 |
Total formula weight | 28780.8 | |
Branched | Number of molecules | 2 |
Total formula weight | 846.7 | |
Non-Polymers* | Number of molecules | 1 |
Total formula weight | 35.5 | |
All* | Total formula weight | 29663.0 |