6TXO
Crystal structure of the haemagglutinin mutant (Gln226Leu, Del228) from an H10N7 seal influenza virus isolated in Germany in complex with avian receptor analogue 3'-SLN
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | B, D, F | Hemagglutinin HA2 | polymer | 177 | 20313.4 | 3 | UniProt (A0A0A7HR51) Pfam (PF00509) In PDB | Influenza A virus (A/harbour seal/Germany/1/2014(H10N7)) | |
| 2 | A, C, E | Hemagglutinin | polymer | 324 | 35427.1 | 3 | UniProt (A0A0A7HR51) Pfam (PF00509) In PDB | Influenza A virus (A/harbour seal/Germany/1/2014(H10N7)) | |
| 3 | G | 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose | branched | 424.4 | 1 | In PDB GlyTouCan (G42666HT) | |||
| 4 | H, I | N-acetyl-alpha-neuraminic acid-(2-3)-beta-D-galactopyranose | branched | 471.4 | 2 | In PDB GlyTouCan (G30207PZ) | |||
| 5 | B | 1,2-ETHANEDIOL | non-polymer | 62.1 | 1 | Chemie (EDO) | |||
| 6 | D, F | 2-acetamido-2-deoxy-beta-D-glucopyranose | non-polymer | 221.2 | 2 | Chemie (NAG) | |||
| 7 | C | CALCIUM ION | non-polymer | 40.1 | 1 | Chemie (CA) | |||
| 8 | E | N-acetyl-alpha-neuraminic acid | non-polymer | 309.3 | 1 | Chemie (SIA) | |||
| 9 | water | water | 18.0 | 154 | Chemie (HOH) |
Sequence modifications
B, D, F: 1 - 176 (UniProt: A0A0A7HR51)
A, C, E: 2 - 323 (UniProt: A0A0A7HR51)
| PDB | External Database | Details |
|---|---|---|
| Lys 177 | - | expression tag |
| PDB | External Database | Details |
|---|---|---|
| Asp 0 | - | expression tag |
| Pro 1 | - | expression tag |
| - | Gly 230 | deletion |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 6 |
| Total formula weight | 167221.3 | |
| Branched | Number of molecules | 3 |
| Total formula weight | 1367.2 | |
| Non-Polymers* | Number of molecules | 5 |
| Total formula weight | 853.8 | |
| All* | Total formula weight | 169442.4 |
