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6TXC

Crystal structure of tetrameric human wt-SAMHD1 (residues 109-626) with GTP, dATP, dCMPNPP and Mg

Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1A, B, C, D, E...
(A, B, C, D, E...)
Deoxynucleoside triphosphate triphosphohydrolase SAMHD1polymer52060208.816UniProt (Q9Y3Z3)
Pfam (PF01966)
Homo sapiens (Human)dNTPase,Dendritic cell-derived IFNG-induced protein,DCIP,Monocyte protein 5,MOP-5,SAM domain and HD domain-containing protein 1,hSAMHD1
2AD, CB, EC, HA, ID...
(M, F, J, C, N...)
FE (III) IONnon-polymer55.816Chemie (FE)
3AA, BA, BD, CD, DB...
(B, M, F, J, C...)
MAGNESIUM IONnon-polymer24.342Chemie (MG)
4AC, AE, CA, ED, FB...
(I, P, B, M, F...)
2'-deoxy-5'-O-[(R)-hydroxy{[(R)-hydroxy(phosphonooxy)phosphoryl]amino}phosphoryl]cytidinenon-polymer466.216Chemie (0KX)
5AB, BC, DA, FD, GB...
(E, I, B, M, F...)
GUANOSINE-5'-TRIPHOSPHATEnon-polymer523.216Chemie (GTP)
6CC, EA, GD, JC, NA...
(I, B, M, J, C...)
SULFATE IONnon-polymer96.19Chemie (SO4)
7BB, DC, FA, GA, HB...
(E, I, B, C, F...)
2'-DEOXYADENOSINE 5'-TRIPHOSPHATEnon-polymer491.216Chemie (DTP)
Sequence modifications
A, B, C, D, E, F, G, H, I, J, K, L, M, N, O, P: 109 - 626 (UniProt: Q9Y3Z3)
PDBExternal DatabaseDetails
Gly 107-expression tag
Ser 108-expression tag
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains16
Total formula weight963340.9
Non-Polymers*Number of molecules115
Total formula weight26467.4
All*Total formula weight989808.4
*Water molecules are not included.

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PDB entries from 2025-06-11

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