6TXB
Crystal structure of Mindy1 mutant (P138A) in complex with Lys48 linked di-ubiquitin
Entity
Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
1 | A | Ubiquitin carboxyl-terminal hydrolase MINDY-1 | polymer | 289 | 31980.1 | 1 | UniProt (Q8N5J2) Pfam (PF04424) In PDB | Homo sapiens (Human) | Deubiquitinating enzyme MINDY-1,Protein FAM63A |
2 | D, H, L | Polyubiquitin-C | polymer | 76 | 8576.8 | 3 | UniProt (P0CG48) Pfam (PF00240) In PDB | Homo sapiens (Human) | |
3 | A, D | SODIUM ION | non-polymer | 23.0 | 4 | Chemie (NA) | |||
4 | A | CHLORIDE ION | non-polymer | 35.5 | 2 | Chemie (CL) | |||
5 | water | water | 18.0 | 57 | Chemie (HOH) |
Sequence modifications
A: 110 - 384 (UniProt: Q8N5J2)
PDB | External Database | Details |
---|---|---|
Gly 96 | - | expression tag |
Pro 97 | - | expression tag |
Leu 98 | - | expression tag |
Gly 99 | - | expression tag |
Ser 100 | - | expression tag |
Pro 101 | - | expression tag |
Glu 102 | - | expression tag |
Phe 103 | - | expression tag |
Pro 104 | - | expression tag |
Gly 105 | - | expression tag |
Arg 106 | - | expression tag |
Leu 107 | - | expression tag |
Glu 108 | - | expression tag |
Met 109 | - | expression tag |
Ala 137 | Cys 137 | engineered mutation |
Ala 138 | Pro 138 | engineered mutation |
Sequence viewer
Contents of the asymmetric unit
Polymers | Number of chains | 4 |
Total formula weight | 57710.6 | |
Non-Polymers* | Number of molecules | 6 |
Total formula weight | 162.9 | |
All* | Total formula weight | 57873.5 |