6TMG
Cryo-EM structure of Toxoplasma gondii mitochondrial ATP synthase dimer, membrane region model
This is a non-PDB format compatible entry.
Entity
Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
1 | q, Q | ATPTG11 | polymer | 134 | 15425.4 | 2 | UniProt (A0A125YPS4) In PDB | Toxoplasma gondii (strain ATCC 50853 / GT1) | |
2 | i, I | ATPTG7 | polymer | 236 | 26866.8 | 2 | UniProt (S7VXW3) In PDB | Toxoplasma gondii (strain ATCC 50853 / GT1) | |
3 | t, T | ATPTG14 | polymer | 133 | 14424.5 | 2 | UniProt (A0A125YLH9) In PDB | Toxoplasma gondii (strain ATCC 50853 / GT1) | |
4 | g, G | ATPTG5 | polymer | 252 | 28162.6 | 2 | UniProt (S7WD71) In PDB | Toxoplasma gondii (strain ATCC 50853 / GT1) | |
5 | o, O | subunit k | polymer | 157 | 17963.5 | 2 | UniProt (A0A125YTD7) In PDB | Toxoplasma gondii (strain ATCC 50853 / GT1) | |
6 | k, K | subunit a | polymer | 224 | 24562.6 | 2 | UniProt (A0A125YSI9) In PDB | Toxoplasma gondii (strain ATCC 50853 / GT1) | |
7 | j, J | subunit i/j | polymer | 229 | 26600.5 | 2 | UniProt (S7UQ82) In PDB | Toxoplasma gondii (strain ATCC 50853 / GT1) | |
8 | s, S | ATPTG13 | polymer | 128 | 14923.2 | 2 | UniProt (A0A125YLN4) In PDB | Toxoplasma gondii (strain ATCC 50853 / GT1) | |
9 | u, U | ATPTG15 | polymer | 126 | 13871.9 | 2 | UniProt (A0A125YRP0) In PDB | Toxoplasma gondii (strain ATCC 50853 / GT1) | |
10 | h, H | ATPTG6 | polymer | 239 | 27477.5 | 2 | UniProt (A0A125YL08) In PDB | Toxoplasma gondii (strain ATCC 50853 / GT1) | |
11 | e, E | ATPTG3 | polymer | 325 | 35159.2 | 2 | UniProt (A0A125YLR0) In PDB | Toxoplasma gondii (strain ATCC 50853 / GT1) | |
12 | x, X | ATPTG17 | polymer | 83 | 9486.7 | 2 | UniProt (S7W180) In PDB | Toxoplasma gondii (strain ATCC 50853 / GT1) | |
13 | b, B | subunit b | polymer | 571 | 64811.6 | 2 | UniProt (S7V2T0) In PDB | Toxoplasma gondii (strain ATCC 50853 / GT1) | |
14 | r, R | ATPTG12 | polymer | 134 | 15400.6 | 2 | UniProt (A0A125YKF7) In PDB | Toxoplasma gondii (strain ATCC 50853 / GT1) | |
15 | p, P | ATPTG10 | polymer | 138 | 15165.2 | 2 | UniProt (A0A125YMA7) Pfam (PF20716) In PDB | Toxoplasma gondii (strain ATCC 50853 / GT1) | |
16 | v, V | subunit f | polymer | 111 | 13030.0 | 2 | UniProt (S7UQT7) In PDB | Toxoplasma gondii (strain ATCC 50853 / GT1) | |
17 | l, L | ATPTG8 | polymer | 208 | 23365.9 | 2 | UniProt (S7W7F1) In PDB | Toxoplasma gondii (strain ATCC 50853 / GT1) | |
18 | c, C | ATPTG1 | polymer | 398 | 46025.4 | 2 | UniProt (S7W9J5) Pfam (PF02167) In PDB | Toxoplasma gondii (strain ATCC 50853 / GT1) | |
19 | d, D | ATPTG2 | polymer | 310 | 35238.5 | 2 | UniProt (A0A125YV76) In PDB | Toxoplasma gondii (strain ATCC 50853 / GT1) | |
20 | m, M | subunit 8 | polymer | 205 | 22344.6 | 2 | UniProt (A0A125YPQ4) In PDB | Toxoplasma gondii (strain ATCC 50853 / GT1) | |
21 | n, N | ATPTG9 | polymer | 166 | 18426.8 | 2 | UniProt (A0A125YUZ2) In PDB | Toxoplasma gondii (strain ATCC 50853 / GT1) | |
22 | f, F | ATPTG4 | polymer | 267 | 28557.4 | 2 | UniProt (S7UVZ7) Pfam (PF00085) In PDB | Toxoplasma gondii (strain ATCC 50853 / GT1) | |
23 | w, W | ATPTG16 | polymer | 106 | 11587.4 | 2 | UniProt (S7VTI0) In PDB | Toxoplasma gondii (strain ATCC 50853 / GT1) | |
24 | a, A | subunit d | polymer | 536 | 61362.3 | 2 | UniProt (S7V493) In PDB | Toxoplasma gondii (strain ATCC 50853 / GT1) | |
25 | V, v, O, o | 1,2-DIACYL-SN-GLYCERO-3-PHOSPHOCHOLINE | non-polymer | 790.1 | 6 | Chemie (PC1) | |||
26 | X, h, x, C, c... | DODECYL-BETA-D-MALTOSIDE | non-polymer | 510.6 | 14 | Chemie (LMT) | |||
27 | E, u, B, h, V... | CARDIOLIPIN | non-polymer | 1464.0 | 18 | Chemie (CDL) | |||
28 | j, C, c, J | 1,2-Dioleoyl-sn-glycero-3-phosphoethanolamine | non-polymer | 749.1 | 6 | Chemie (PEE) |
Sequence modifications
g, G: 1 - 252 (UniProt: S7WD71)
h, H: 1 - 239 (UniProt: A0A125YL08)
e, E: 1 - 325 (UniProt: A0A125YLR0)
x, X: 1 - 76 (UniProt: S7W180)
b, B: 3 - 573 (UniProt: S7V2T0)
v, V: 1 - 111 (UniProt: S7UQT7)
n, N: 1 - 166 (UniProt: A0A125YUZ2)
a, A: 1 - 536 (UniProt: S7V493)
PDB | External Database | Details |
---|---|---|
Val 51 | Phe 51 | conflict |
Cys 73 | Ser 73 | conflict |
Lys 110 | Glu 110 | conflict |
Thr 233 | Met 233 | conflict |
PDB | External Database | Details |
---|---|---|
Asn 89 | His 89 | conflict |
PDB | External Database | Details |
---|---|---|
- | Lys 14 | deletion |
Pro 63 | Ser 64 | conflict |
Leu 99 | Pro 100 | conflict |
Ala 312 | Thr 313 | conflict |
PDB | External Database | Details |
---|---|---|
Trp 77 | - | expression tag |
Met 78 | - | expression tag |
Phe 79 | - | expression tag |
Gly 80 | - | expression tag |
Asn 81 | - | expression tag |
Ser 82 | - | expression tag |
Tyr 83 | - | expression tag |
PDB | External Database | Details |
---|---|---|
Leu 50 | Ser 48 | conflict |
Thr 474 | Ala 472 | conflict |
PDB | External Database | Details |
---|---|---|
Ala 54 | Val 54 | conflict |
PDB | External Database | Details |
---|---|---|
Ser 140 | Ala 140 | conflict |
PDB | External Database | Details |
---|---|---|
Thr 351 | Ala 484 | conflict |
Sequence viewer
Contents of the asymmetric unit
Polymers | Number of chains | 48 |
Total formula weight | 1220480.3 | |
Non-Polymers* | Number of molecules | 44 |
Total formula weight | 42736.7 | |
All* | Total formula weight | 1263217.0 |