6THG

Cedar Virus attachment glycoprotein (G) in complex with human ephrin-B1

Entity

Entity ID	Chain ID	Description	Type	Chain length	Formula weight	Number of molecules	DB Name (Accession)	Biological source	Descriptive keywords
1	B, A, E, G, I	Attachment glycoprotein	polymer	426	48821.0	5	UniProt (A0A185KRV2) Pfam (PF00423) UniProt (by SIFTS) (J7H333) In PDB	Cedar virus
2	D, C, F, H, J	Ephrin-B1	polymer	151	17248.7	5	UniProt (P98172) Pfam (PF00812) In PDB	Homo sapiens (Human)	EFL-3,ELK ligand,ELK-L,EPH-related receptor tyrosine kinase ligand 2,LERK-2
3	K, M, N, O, Q...	beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose	branched		586.5	6	In PDB GlyTouCan (G15407YE)
4	L, P, R, S, T...	2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose	branched		424.4	7	In PDB GlyTouCan (G42666HT)
5	D, A, E, G, I...	2-acetamido-2-deoxy-beta-D-glucopyranose	non-polymer		221.2	17	Chemie (NAG)

Sequence modifications

B, A, E, G, I: 209 - 622 (UniProt: A0A185KRV2)

PDB	External Database	Details
Glu 206	-	expression tag
Thr 207	-	expression tag
Gly 208	-	expression tag
Gly 623	-	expression tag
Thr 624	-	expression tag
Lys 625	-	expression tag
His 626	-	expression tag
His 627	-	expression tag
His 628	-	expression tag
His 629	-	expression tag
His 630	-	expression tag
His 631	-	expression tag

D, C, F, H, J: 29 - 167 (UniProt: P98172)

PDB	External Database	Details
Glu 26	-	expression tag
Thr 27	-	expression tag
Gly 28	-	expression tag
Gly 168	-	expression tag
Thr 169	-	expression tag
Lys 170	-	expression tag
His 171	-	expression tag
His 172	-	expression tag
His 173	-	expression tag
His 174	-	expression tag
His 175	-	expression tag
His 176	-	expression tag

Contents of the asymmetric unit

Polymers	Number of chains	10
	Total formula weight	330348.2
Branched	Number of molecules	13
	Total formula weight	6490.1
Non-Polymers*	Number of molecules	17
	Total formula weight	3760.5
All*	Total formula weight	340598.8

*Water molecules are not included.