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6THG

Cedar Virus attachment glycoprotein (G) in complex with human ephrin-B1

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsDIAMOND BEAMLINE I24
Synchrotron siteDiamond
BeamlineI24
Temperature [K]100
Detector technologyPIXEL
Collection date2018-12-09
DetectorDECTRIS PILATUS3 S 6M
Wavelength(s)0.9686
Spacegroup nameP 21 21 21
Unit cell lengths112.796, 138.435, 235.394
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution69.218 - 4.074
R-factor0.2778
Rwork0.276
R-free0.31410
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)6thb
Data reduction softwarexia2
Data scaling softwarexia2
Phasing softwarePHASER
Refinement softwarePHENIX (1.14_3260)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]70.1704.140
High resolution limit [Å]4.0704.070
Rmerge0.4072.192
Rpim0.1730.914
Number of reflections301201373
<I/σ(I)>3.40.9
Completeness [%]99.892.4
Redundancy6.5
CC(1/2)0.9650.359
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP29325% polyethylene glycol 1500 (w/v), 0.1 M PCB (sodium propionate, sodium cacodylate, and BIS-TRIS propane) pH 5.0, and 0.02 M cadmium chloride dihydrate.

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