6SQG
Crystal structure of viral rhodopsin OLPVRII
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A, B, C, D (A, B, C, D) | viral rhodopsin OLPVRII | polymer | 211 | 24312.4 | 4 | UniProt (F2Y2Z0) | Organic Lake phycodnavirus | |
| 2 | E (E) | viral rhodopsin OLPVRII | polymer | 219 | 25383.5 | 1 | UniProt (F2Y2Z0) | Organic Lake phycodnavirus | |
| 3 | AA, AB, AC, BA, BC... (B, C, E, D, A) | EICOSANE | non-polymer | 282.5 | 71 | Chemie (LFA) PubChem (8222) | |||
| 4 | BB, EC, MA, OB, W (C, E, B, D, A) | RETINAL | non-polymer | 284.4 | 5 | Chemie (RET) PubChem (638015) PubChem (5381765) | |||
| 5 | CB, PB (D, E) | (2S)-2,3-dihydroxypropyl (9Z)-octadec-9-enoate | non-polymer | 356.5 | 2 | Chemie (OLB) PubChem (12178130) | |||
| 6 | FC, GC, HC, IC, JC (A, B, C, D, E) | water | water | 18.0 | 217 | Chemie (HOH) |
Sequence modifications
E: 1 - 211 (UniProt: F2Y2Z0)
| PDB | External Database | Details |
|---|---|---|
| Leu 212 | - | expression tag |
| Glu 213 | - | expression tag |
| His 214 | - | expression tag |
| His 215 | - | expression tag |
| His 216 | - | expression tag |
| His 217 | - | expression tag |
| His 218 | - | expression tag |
| His 219 | - | expression tag |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 5 |
| Total formula weight | 122633.1 | |
| Non-Polymers* | Number of molecules | 78 |
| Total formula weight | 22196.1 | |
| All* | Total formula weight | 144829.2 |
