6SEJ
Structure of a functional monomeric properdin lacking TSR3
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A (A) | Properdin | polymer | 170 | 18636.9 | 1 | UniProt (P27918) Pfam (PF18487) Pfam (PF00090) | Homo sapiens (Human) | Complement factor P |
| 2 | B (B) | Properdin | polymer | 221 | 24724.1 | 1 | UniProt (P27918) Pfam (PF00090) Pfam (PF22195) | Homo sapiens (Human) | Complement factor P |
| 3 | C, D, E (C, D, E) | beta-D-glucopyranose-(1-3)-alpha-L-fucopyranose | branched | 326.3 | 3 | In PDB GlyTouCan (G36855WW) | |||
| 4 | F (F) | 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[alpha-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose | branched | 570.5 | 1 | In PDB GlyTouCan (G21290RB) | |||
| 5 | G, H, I, J, K... (A, B) | alpha-D-mannopyranose | non-polymer | 180.2 | 12 | Chemie (MAN) |
Sequence modifications
A: 28 - 191 (UniProt: P27918)
B: 256 - 469 (UniProt: P27918)
| PDB | External Database | Details |
|---|---|---|
| Glu 192 | - | expression tag |
| Asn 193 | - | expression tag |
| Leu 194 | - | expression tag |
| Tyr 195 | - | expression tag |
| Phe 196 | - | expression tag |
| Gln 197 | - | expression tag |
| PDB | External Database | Details |
|---|---|---|
| Gly 255 | - | expression tag |
| Glu 470 | - | expression tag |
| Asn 471 | - | expression tag |
| Leu 472 | - | expression tag |
| Tyr 473 | - | expression tag |
| Phe 474 | - | expression tag |
| Gln 475 | - | expression tag |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 2 |
| Total formula weight | 43361.1 | |
| Branched | Number of molecules | 4 |
| Total formula weight | 1549.4 | |
| Non-Polymers* | Number of molecules | 12 |
| Total formula weight | 2161.9 | |
| All* | Total formula weight | 47072.4 |
