6S8N
Cryo-EM structure of LptB2FGC in complex with lipopolysaccharide
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A, B (A, B) | Lipopolysaccharide ABC transporter, ATP-binding protein LptB | polymer | 241 | 26837.7 | 2 | UniProt (E7T9E6) Pfam (PF00005) Pfam (PF12399) UniProt (by SIFTS) (P0A9V4) | Shigella flexneri | |
| 2 | C (C) | Lipopolysaccharide export system protein LptC | polymer | 191 | 21726.6 | 1 | UniProt (D2A8C1) Pfam (PF06835) UniProt (by SIFTS) (P0ADW2) | Shigella flexneri | |
| 3 | D (F) | Lipopolysaccharide export system permease protein LptF | polymer | 366 | 40345.4 | 1 | UniProt (P0AFA1) Pfam (PF03739) | Shigella flexneri | |
| 4 | E (G) | Inner membrane protein yjgQ | polymer | 360 | 39622.4 | 1 | UniProt (A0A2S4N3I3) Pfam (PF03739) UniProt (by SIFTS) (A0A0H2V3J7) | Shigella flexneri | LPS export ABC transporter permease LptG |
| 5 | F, L (B, G) | 2-decyl-5,6-dimethoxy-3-methylcyclohexa-2,5-diene-1,4-dione | non-polymer | 322.4 | 2 | Chemie (DCQ) | |||
| 6 | G, J (F, G) | Lauryl Maltose Neopentyl Glycol | non-polymer | 1005.2 | 2 | Chemie (LMN) | |||
| 7 | H, K (F, G) | DODECYL-BETA-D-MALTOSIDE | non-polymer | 510.6 | 2 | Chemie (LMT) | |||
| 8 | I (G) | lipopolysaccharide fragment | non-polymer | 1814.4 | 1 | Chemie (L0W) |
Sequence modifications
F: 1 - 366 (UniProt: P0AFA1)
| PDB | External Database | Details |
|---|---|---|
| Val 274 | Phe 274 | conflict |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 5 |
| Total formula weight | 155369.8 | |
| Non-Polymers* | Number of molecules | 7 |
| Total formula weight | 5490.9 | |
| All* | Total formula weight | 160860.6 |
