6S20
Metabolism of multiple glycosaminoglycans by bacteroides thetaiotaomicron is orchestrated by a versatile core genetic locus (BT33336S-sulf)
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A (C) | N-acetylgalactosamine-6-O-sulfatase | polymer | 513 | 56635.4 | 1 | UniProt (Q8A2H2) Pfam (PF00884) Pfam (PF16347) | Bacteroides thetaiotaomicron (strain ATCC 29148 / DSM 2079 / NCTC 10582 / E50 / VPI-5482) | |
| 2 | B (C) | 2-acetamido-2-deoxy-6-O-sulfo-beta-D-galactopyranose | non-polymer | 301.3 | 1 | Chemie (NG6) | |||
| 3 | C (C) | TRIETHYLENE GLYCOL | non-polymer | 150.2 | 1 | Chemie (PGE) | |||
| 4 | D (C) | CALCIUM ION | non-polymer | 40.1 | 1 | Chemie (CA) | |||
| 5 | E (C) | water | water | 18.0 | 112 | Chemie (HOH) |
Sequence modifications
C: 22 - 511 (UniProt: Q8A2H2)
| PDB | External Database | Details |
|---|---|---|
| Met -1 | - | initiating methionine |
| Gly 0 | - | expression tag |
| Ser 1 | - | expression tag |
| Ser 2 | - | expression tag |
| His 3 | - | expression tag |
| His 4 | - | expression tag |
| His 5 | - | expression tag |
| His 6 | - | expression tag |
| His 7 | - | expression tag |
| His 8 | - | expression tag |
| Ser 9 | - | expression tag |
| Ser 10 | - | expression tag |
| Gly 11 | - | expression tag |
| Leu 12 | - | expression tag |
| Val 13 | - | expression tag |
| Pro 14 | - | expression tag |
| Arg 15 | - | expression tag |
| Gly 16 | - | expression tag |
| Ser 17 | - | expression tag |
| His 18 | - | expression tag |
| Met 19 | - | expression tag |
| Ala 20 | - | expression tag |
| Ser 21 | - | expression tag |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 1 |
| Total formula weight | 56635.4 | |
| Non-Polymers* | Number of molecules | 3 |
| Total formula weight | 491.5 | |
| All* | Total formula weight | 57126.9 |
