6S0X
Erythromycin Resistant Staphylococcus aureus 70S ribosome (delta R88 A89 uL22) in complex with erythromycin.
This is a non-PDB format compatible entry.
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A (A) | 23S ribosomal RNA | polymer | 2905 | 940976.0 | 1 | Staphylococcus aureus | ||
| 2 | B (B) | 5S ribosomal RNA | polymer | 115 | 36974.9 | 1 | GenBank (1434110260) | Staphylococcus aureus | |
| 3 | C (C) | 50S ribosomal protein L2 | polymer | 274 | 29827.6 | 1 | UniProt (B3VKN3) Pfam (PF00181) Pfam (PF03947) | Staphylococcus aureus | |
| 4 | D (D) | 50S ribosomal protein L3 | polymer | 215 | 23199.5 | 1 | UniProt (W8U3W0) Pfam (PF00297) | Staphylococcus aureus | |
| 5 | E (E) | 50S ribosomal protein L4 | polymer | 206 | 22364.5 | 1 | UniProt (W8TRC7) Pfam (PF00573) | Staphylococcus aureus | |
| 6 | F (F) | 50S ribosomal protein L5 | polymer | 173 | 19460.6 | 1 | UniProt (W8TUC3) Pfam (PF00673) Pfam (PF00281) | Staphylococcus aureus | |
| 7 | G (G) | 50S ribosomal protein L6 | polymer | 173 | 19270.9 | 1 | UniProt (W8U3X2) Pfam (PF00347) | Staphylococcus aureus | |
| 8 | H (H) | 50S ribosomal protein L13 | polymer | 145 | 16359.4 | 1 | UniProt (W8TUE6) Pfam (PF00572) | Staphylococcus aureus | |
| 9 | I (I) | 50S ribosomal protein L14 | polymer | 122 | 13157.3 | 1 | UniProt (A0A077UUA0) Pfam (PF00238) | Staphylococcus aureus | |
| 10 | J (J) | 50S ribosomal protein L15 | polymer | 146 | 15628.9 | 1 | UniProt (A0A077UGA7) Pfam (PF00828) | Staphylococcus aureus | |
| 11 | K (K) | 50S ribosomal protein L16 | polymer | 137 | 15599.4 | 1 | UniProt (A0A077V4G0) Pfam (PF00252) | Staphylococcus aureus | |
| 12 | L (L) | 50S ribosomal protein L17 | polymer | 120 | 13583.5 | 1 | UniProt (A0A077UG91) Pfam (PF01196) | Staphylococcus aureus | |
| 13 | M (M) | 50S ribosomal protein L18 | polymer | 118 | 12992.9 | 1 | UniProt (W8TRE0) Pfam (PF00861) | Staphylococcus aureus | |
| 14 | N (N) | 50S ribosomal protein L19 | polymer | 114 | 13104.4 | 1 | UniProt (A0A077UVB6) Pfam (PF01245) | Staphylococcus aureus | |
| 15 | O (O) | 50S ribosomal protein L20 | polymer | 116 | 13459.9 | 1 | UniProt (A0A077VMP6) Pfam (PF00453) | Staphylococcus aureus | |
| 16 | P (P) | 50S ribosomal protein L21 | polymer | 102 | 11354.1 | 1 | UniProt (D7URR3) Pfam (PF00829) | Staphylococcus aureus | |
| 17 | Q (Q) | 50S ribosomal protein L22 | polymer | 110 | 12100.1 | 1 | UniProt (A0A077UKF9) Pfam (PF00237) | Staphylococcus aureus | |
| 18 | R (R) | 50S ribosomal protein L23 | polymer | 89 | 10380.1 | 1 | UniProt (W8TUB4) Pfam (PF00276) | Staphylococcus aureus | |
| 19 | S (S) | 50S ribosomal protein L24 | polymer | 103 | 11316.2 | 1 | UniProt (W8TRD5) Pfam (PF00467) Pfam (PF17136) | Staphylococcus aureus | |
| 20 | T (T) | 50S ribosomal protein L25 | polymer | 94 | 10462.2 | 1 | UniProt (A0A133Q8Z9) | Staphylococcus aureus | General stress protein CTC |
| 21 | U (U) | 50S ribosomal protein L27 | polymer | 77 | 8409.5 | 1 | UniProt (A0A077ULC5) Pfam (PF01016) | Staphylococcus aureus | |
| 22 | V (V) | 50S ribosomal protein L28 | polymer | 49 | 5499.4 | 1 | UniProt (A0A077URJ8) Pfam (PF00830) | Staphylococcus aureus | |
| 23 | W (W) | 50S ribosomal protein L29 | polymer | 67 | 7845.9 | 1 | UniProt (A0A077W1J5) Pfam (PF00831) | Staphylococcus aureus | |
| 24 | X (X) | 50S ribosomal protein L30 | polymer | 58 | 6434.5 | 1 | UniProt (W8UVN7) Pfam (PF00327) | Staphylococcus aureus | |
| 25 | Y (Y) | 50S ribosomal protein L31 type B | polymer | 59 | 6909.7 | 1 | UniProt (A0A380EL30) Pfam (PF01197) | Staphylococcus aureus | |
| 26 | Z (Z) | 50S ribosomal protein L32 | polymer | 48 | 5569.6 | 1 | UniProt (A0A1Q8DAT0) | Staphylococcus aureus | |
| 27 | AA (1) | 50S ribosomal protein L33 | polymer | 47 | 5684.6 | 1 | UniProt (A0A077V2P0) Pfam (PF00471) | Staphylococcus aureus | |
| 28 | BA (2) | 50S ribosomal protein L34 | polymer | 43 | 5252.4 | 1 | UniProt (W8TQ59) Pfam (PF00468) | Staphylococcus aureus | |
| 29 | CA (3) | 50S ribosomal protein L35 | polymer | 64 | 7462.0 | 1 | UniProt (A0A077UL47) Pfam (PF01632) | Staphylococcus aureus | |
| 30 | DA (4) | 50S ribosomal protein L36 | polymer | 37 | 4318.4 | 1 | UniProt (A0A077UGV8) Pfam (PF00444) | Staphylococcus aureus | |
| 31 | EA (a) | 16S ribosomal RNA | polymer | 1539 | 498060.0 | 1 | GenBank (1248686583) | Staphylococcus aureus | |
| 32 | FA (b) | 30S ribosomal protein S2 | polymer | 226 | 25929.1 | 1 | UniProt (A0A2X2M020) Pfam (PF00318) | Staphylococcus aureus | |
| 33 | GA (c) | 30S ribosomal protein S3 | polymer | 202 | 22684.2 | 1 | UniProt (A0A077UU26) Pfam (PF07650) Pfam (PF00189) | Staphylococcus aureus | |
| 34 | HA (d) | 30S ribosomal protein S4 | polymer | 198 | 22849.1 | 1 | UniProt (W8TVK2) Pfam (PF00163) Pfam (PF01479) | Staphylococcus aureus | |
| 35 | IA (e) | 30S ribosomal protein S5 | polymer | 156 | 16522.1 | 1 | UniProt (W8TUC9) Pfam (PF00333) Pfam (PF03719) | Staphylococcus aureus | |
| 36 | JA (f) | 30S ribosomal protein S6 | polymer | 95 | 11239.8 | 1 | UniProt (W8TPC6) Pfam (PF01250) | Staphylococcus aureus | |
| 37 | KA (g) | 30S ribosomal protein S7 | polymer | 152 | 17181.8 | 1 | UniProt (A0A077VHU6) Pfam (PF00177) | Staphylococcus aureus | |
| 38 | LA (h) | 30S ribosomal protein S8 | polymer | 131 | 14723.1 | 1 | UniProt (W8U8T8) Pfam (PF00410) | Staphylococcus aureus | |
| 39 | MA (i) | 30S ribosomal protein S9 | polymer | 127 | 14312.3 | 1 | UniProt (A0A1Q4GY48) Pfam (PF00380) | Staphylococcus aureus | |
| 40 | NA (j) | 30S ribosomal protein S10 | polymer | 97 | 11009.7 | 1 | UniProt (A0A0H2K0A0) Pfam (PF00338) | Staphylococcus aureus | |
| 41 | OA (k) | 30S ribosomal protein S11 | polymer | 114 | 12047.6 | 1 | UniProt (A0A077UKD6) Pfam (PF00411) | Staphylococcus aureus | |
| 42 | PA (l) | 30S ribosomal protein S12 | polymer | 135 | 15075.6 | 1 | UniProt (A0A133PZQ5) | Staphylococcus aureus | |
| 43 | QA (m) | 30S ribosomal protein S13 | polymer | 104 | 11991.7 | 1 | UniProt (W8U8U6) Pfam (PF00416) | Staphylococcus aureus | |
| 44 | RA (n) | 30S ribosomal protein S14 type Z | polymer | 60 | 7186.6 | 1 | UniProt (A0A077UGW7) Pfam (PF00253) | Staphylococcus aureus | |
| 45 | SA (o) | 30S ribosomal protein S15 | polymer | 88 | 10503.1 | 1 | UniProt (W8U6H8) Pfam (PF00312) | Staphylococcus aureus | |
| 46 | TA (p) | 30S ribosomal protein S16 | polymer | 89 | 9993.5 | 1 | UniProt (W8U6K4) Pfam (PF00886) | Staphylococcus aureus | |
| 47 | UA (q) | 30S ribosomal protein S17 | polymer | 80 | 9366.9 | 1 | UniProt (A0A077VLD5) Pfam (PF00366) | Staphylococcus aureus | |
| 48 | VA (r) | 30S ribosomal protein S18 | polymer | 54 | 6404.6 | 1 | UniProt (A0A077UZF4) Pfam (PF01084) | Staphylococcus aureus | |
| 49 | WA (s) | 30S ribosomal protein S19 | polymer | 80 | 9205.6 | 1 | UniProt (A0A133PYC3) | Staphylococcus aureus | |
| 50 | XA (t) | 30S ribosomal protein S20 | polymer | 81 | 8779.1 | 1 | UniProt (W8UXC3) Pfam (PF01649) | Staphylococcus aureus | |
| 51 | YA (u) | 30S ribosomal protein S21 | polymer | 52 | 6241.3 | 1 | UniProt (A0A380DEA2) | Staphylococcus aureus | |
| 52 | ZA (v) | Ribosome hibernation promoting factor | polymer | 162 | 18955.5 | 1 | UniProt (W8USK0) Pfam (PF02482) Pfam (PF16321) UniProt (by SIFTS) (D2Z097) | Staphylococcus aureus | HPF |
| 53 | AB (A) | ERYTHROMYCIN A | non-polymer | 733.9 | 1 | Chemie (ERY) |
Sequence modifications
Q: 1 - 110 (UniProt: A0A077UKF9)
v: 2 - 187 (UniProt: W8USK0)
| PDB | External Database | Details |
|---|---|---|
| - | Arg 88 | deletion |
| - | Ala 89 | deletion |
| PDB | External Database | Details |
|---|---|---|
| - | Glu 107 | deletion |
| - | Val 108 | deletion |
| - | Phe 109 | deletion |
| - | Val 110 | deletion |
| - | Ala 111 | deletion |
| - | Glu 112 | deletion |
| - | Leu 113 | deletion |
| - | Gln 114 | deletion |
| - | Glu 115 | deletion |
| - | Met 116 | deletion |
| - | Gln 117 | deletion |
| - | Glu 118 | deletion |
| - | Thr 119 | deletion |
| - | Gln 120 | deletion |
| - | Val 121 | deletion |
| - | Asp 122 | deletion |
| - | Asn 123 | deletion |
| - | Asp 124 | deletion |
| - | Ala 125 | deletion |
| - | Tyr 126 | deletion |
| - | Asp 127 | deletion |
| - | Asp 128 | deletion |
| - | Asn 129 | deletion |
| - | Glu 130 | deletion |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 52 |
| Total formula weight | 2105221.0 | |
| Non-Polymers* | Number of molecules | 1 |
| Total formula weight | 733.9 | |
| All* | Total formula weight | 2105954.9 |
