6S08
Crystal Structure of Properdin (TSR domains N1 & 456)
Entity
Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
1 | A | Properdin | polymer | 225 | 25058.5 | 1 | UniProt (P27918) Pfam (PF00090) Pfam (PF22195) In PDB | Homo sapiens (Human) | Complement factor P |
2 | B | Properdin | polymer | 110 | 11891.4 | 1 | UniProt (P27918) Pfam (PF18487) Pfam (PF00090) In PDB | Homo sapiens (Human) | Complement factor P |
3 | C | beta-D-glucopyranose-(1-3)-alpha-L-fucopyranose | branched | 326.3 | 1 | In PDB GlyTouCan (G36855WW) | |||
4 | A, B | alpha-D-mannopyranose | non-polymer | 180.2 | 8 | Chemie (MAN) | |||
5 | A | TRIETHYLENE GLYCOL | non-polymer | 150.2 | 1 | Chemie (PGE) | |||
6 | A | SODIUM ION | non-polymer | 23.0 | 1 | Chemie (NA) | |||
7 | B | alpha-L-fucopyranose | non-polymer | 164.2 | 1 | Chemie (FUC) | |||
8 | water | water | 18.0 | 116 | Chemie (HOH) |
Sequence modifications
A: 256 - 469 (UniProt: P27918)
B: 26 - 132 (UniProt: P27918)
PDB | External Database | Details |
---|---|---|
Gly 254 | - | expression tag |
Ser 255 | - | expression tag |
Ala 470 | - | expression tag |
Ala 471 | - | expression tag |
Ala 472 | - | expression tag |
His 473 | - | expression tag |
His 474 | - | expression tag |
His 475 | - | expression tag |
His 476 | - | expression tag |
His 477 | - | expression tag |
His 478 | - | expression tag |
PDB | External Database | Details |
---|---|---|
Ala 133 | - | expression tag |
Ala 134 | - | expression tag |
Ala 135 | - | expression tag |
Sequence viewer
Contents of the asymmetric unit
Polymers | Number of chains | 2 |
Total formula weight | 36949.8 | |
Branched | Number of molecules | 1 |
Total formula weight | 326.3 | |
Non-Polymers* | Number of molecules | 11 |
Total formula weight | 1778.6 | |
All* | Total formula weight | 39054.7 |