6RMU
Crystal structure of disulphide-linked human C3d dimer in complex with Staphylococcus aureus complement subversion protein Sbi-IV
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A, C (A, B) | Complement C3 | polymer | 310 | 34778.8 | 2 | UniProt (P01024) Pfam (PF07678) | Homo sapiens (Human) | C3 and PZP-like alpha-2-macroglobulin domain-containing protein 1 |
| 2 | B, D (C, D) | Immunoglobulin-binding protein Sbi | polymer | 81 | 9269.5 | 2 | UniProt (Q931F4) Pfam (PF11621) UniProt (by SIFTS) (Q2FVK5) | Staphylococcus aureus subsp. aureus Mu50 | |
| 3 | E (A) | DI(HYDROXYETHYL)ETHER | non-polymer | 106.1 | 1 | Chemie (PEG) | |||
| 4 | F (B) | 1,2-ETHANEDIOL | non-polymer | 62.1 | 1 | Chemie (EDO) | |||
| 5 | G, H, I, J (A, C, B, D) | water | water | 18.0 | 259 | Chemie (HOH) |
Sequence modifications
A, B: 3 - 310 (UniProt: P01024)
C, D: 12 - 80 (UniProt: Q931F4)
| PDB | External Database | Details |
|---|---|---|
| Met 1 | - | initiating methionine |
| Leu 2 | - | expression tag |
| PDB | External Database | Details |
|---|---|---|
| Met 0 | - | initiating methionine |
| Arg 1 | - | expression tag |
| Gly 2 | - | expression tag |
| Ser 3 | - | expression tag |
| His 4 | - | expression tag |
| His 5 | - | expression tag |
| His 6 | - | expression tag |
| His 7 | - | expression tag |
| His 8 | - | expression tag |
| His 9 | - | expression tag |
| Gly 10 | - | expression tag |
| Ser 11 | - | expression tag |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 4 |
| Total formula weight | 88096.6 | |
| Non-Polymers* | Number of molecules | 2 |
| Total formula weight | 168.2 | |
| All* | Total formula weight | 88264.8 |






