6RFL
Structure of the complete Vaccinia DNA-dependent RNA polymerase complex
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | B | DNA-dependent RNA polymerase subunit rpo132 | polymer | 1164 | 133526.9 | 1 | UniProt (B9U1Q1) In PDB | Vaccinia virus GLV-1h68 | |
| 2 | E | DNA-directed RNA polymerase subunit | polymer | 185 | 21365.7 | 1 | UniProt (B9U1I0) In PDB | Vaccinia virus GLV-1h68 | |
| 3 | F | DNA-directed RNA polymerase 19 kDa subunit | polymer | 164 | 19020.1 | 1 | UniProt (B9U1M4) In PDB | Vaccinia virus GLV-1h68 | |
| 4 | G | DNA-dependent RNA polymerase subunit rpo18 | polymer | 161 | 17917.2 | 1 | UniProt (B9U1K4) In PDB | Vaccinia virus GLV-1h68 | |
| 5 | I | Putative H4L RNA polymerase-associated transcription factor RAP94 | polymer | 795 | 93667.6 | 1 | UniProt (Q1PIU7) Pfam (PF03294) In PDB | Vaccinia virus GLV-1h68 | RAP94,RNA polymerase rpo94,RNA polymerase-associated transcription-specificity factor RAP94,VACV098 |
| 6 | J | DNA-dependent RNA polymerase subunit rpo7 | polymer | 63 | 7299.7 | 1 | UniProt (B9U1G3) In PDB | Vaccinia virus GLV-1h68 | |
| 7 | L | Small subunit of mRNA capping enzyme | polymer | 287 | 33396.7 | 1 | UniProt (B9U1L2) In PDB | Vaccinia virus GLV-1h68 | |
| 8 | O | Large subunit of mRNA capping enzyme | polymer | 844 | 96888.8 | 1 | UniProt (B9U1J2) In PDB | Vaccinia virus GLV-1h68 | |
| 9 | R, Q | Virion core protein | polymer | 129 | 14914.1 | 2 | UniProt (B9U1E2) In PDB | Vaccinia virus GLV-1h68 | |
| 10 | K | Transcription factor VETF 82kDa large subunit | polymer | 710 | 82398.9 | 1 | UniProt (B9U1M6) In PDB | Vaccinia virus GLV-1h68 | |
| 11 | U | chr17.trna16-GlnTTG | polymer | 72 | 23108.7 | 1 | Homo sapiens | ||
| 12 | A | DNA-dependent RNA polymerase subunit rpo147 | polymer | 1286 | 146995.7 | 1 | UniProt (B9U1I2) In PDB | Vaccinia virus GLV-1h68 | |
| 13 | Y | Nucleoside triphosphate phosphohydrolase-I | polymer | 631 | 72465.3 | 1 | UniProt (B9U1K8) In PDB | Vaccinia virus GLV-1h68 | |
| 14 | C | DNA-directed RNA polymerase 35 kDa subunit | polymer | 305 | 35430.7 | 1 | UniProt (B9U1R2) In PDB | Vaccinia virus GLV-1h68 | |
| 15 | S | DNA-directed RNA polymerase 30 kDa polypeptide | polymer | 259 | 30074.3 | 1 | UniProt (B9U1D1) In PDB | Vaccinia virus GLV-1h68 | |
| 16 | B, I, A | ZINC ION | non-polymer | 65.4 | 4 | Chemie (ZN) | |||
| 17 | A | MAGNESIUM ION | non-polymer | 24.3 | 1 | Chemie (MG) | |||
| 18 | water | water | 18.0 | 61 | Chemie (HOH) |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 16 |
| Total formula weight | 843384.4 | |
| Non-Polymers* | Number of molecules | 5 |
| Total formula weight | 285.9 | |
| All* | Total formula weight | 843670.3 |
