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6RF8

Cryo-EM structure of the N-terminal DC repeat (NDC) of NDC-NDC chimera (human sequence) bound to 13-protofilament GDP-microtubule

Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1NNeuronal migration protein doublecortinpolymer9911441.81UniProt (O43602)
Pfam (PF03607)
In PDB
Homo sapiens (Human)Doublin,Lissencephalin-X,Lis-X
2b, BTubulin beta-2B chainpolymer42948113.12UniProt (Q6B856)
Pfam (PF00091)
Pfam (PF03953)
In PDB
Bos taurus (Bovine)
3A, aTubulin alpha-1B chainpolymer43248263.62UniProt (P81947)
Pfam (PF00091)
Pfam (PF03953)
In PDB
Bos taurus (Bovine)Alpha-tubulin ubiquitous,Tubulin K-alpha-1,Tubulin alpha-ubiquitous chain
4b, BGUANOSINE-5'-DIPHOSPHATEnon-polymer443.22Chemie (GDP)
5A, aGUANOSINE-5'-TRIPHOSPHATEnon-polymer523.22Chemie (GTP)
6A, aMAGNESIUM IONnon-polymer24.32Chemie (MG)
Sequence modifications
b, B: 1 - 429 (UniProt: Q6B856)
PDBExternal DatabaseDetails
Ala 55Thr 55conflict
Val 170Met 170conflict
Ala 296Ser 296conflict
Val 316Ile 316conflict
A, a: 1 - 441 (UniProt: P81947)
PDBExternal DatabaseDetails
-Ser 38deletion
-Asp 39deletion
-Lys 40deletion
-Thr 41deletion
-Ile 42deletion
-Gly 43deletion
-Gly 44deletion
-Gly 45deletion
-Asp 46deletion
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains5
Total formula weight204195.3
Non-Polymers*Number of molecules6
Total formula weight1981.4
All*Total formula weight206176.7
*Water molecules are not included.

220113

PDB entries from 2024-05-22

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