6R1B
Crystal structure of UgpB from Mycobacterium tuberculosis in complex with glycerophosphocholine
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A | Putative Sn-glycerol-3-phosphate-binding lipoprotein UgpB | polymer | 394 | 42813.5 | 1 | UniProt (A0A0U0RXC0) Pfam (PF01547) UniProt (by SIFTS) (P71619) In PDB | Mycobacterium tuberculosis | |
| 2 | B | Putative Sn-glycerol-3-phosphate-binding lipoprotein UgpB | polymer | 395 | 42870.6 | 1 | UniProt (A0A0U0RXC0) Pfam (PF01547) UniProt (by SIFTS) (P71619) In PDB | Mycobacterium tuberculosis | |
| 3 | C | Putative Sn-glycerol-3-phosphate-binding lipoprotein UgpB | polymer | 384 | 41656.4 | 1 | UniProt (A0A0U0RXC0) Pfam (PF01547) UniProt (by SIFTS) (P71619) In PDB | Mycobacterium tuberculosis | |
| 4 | D | Putative Sn-glycerol-3-phosphate-binding lipoprotein UgpB | polymer | 382 | 41368.0 | 1 | UniProt (A0A0U0RXC0) Pfam (PF01547) UniProt (by SIFTS) (P71619) In PDB | Mycobacterium tuberculosis | |
| 5 | A, B, C, D | 2-(((R)-2,3-DIHYDROXYPROPYL)PHOSPHORYLOXY)-N,N,N-TRIMETHYLETHANAMINIUM | non-polymer | 258.2 | 4 | Chemie (CH5) | |||
| 6 | A, B, C, D | MAGNESIUM ION | non-polymer | 24.3 | 5 | Chemie (MG) | |||
| 7 | A, B, C | GLYCEROL | non-polymer | 92.1 | 4 | Chemie (GOL) | |||
| 8 | water | water | 18.0 | 259 | Chemie (HOH) |
Sequence modifications
C: 35 - 430 (UniProt: A0A0U0RXC0)
D: 35 - 428 (UniProt: A0A0U0RXC0)
| PDB | External Database | Details |
|---|---|---|
| - | Asp 330 | deletion |
| - | Ala 331 | deletion |
| - | Ser 332 | deletion |
| - | Glu 333 | deletion |
| - | Arg 334 | deletion |
| - | His 335 | deletion |
| - | Tyr 336 | deletion |
| - | Leu 337 | deletion |
| - | Ala 338 | deletion |
| - | Asp 339 | deletion |
| - | Asn 340 | deletion |
| - | Pro 341 | deletion |
| PDB | External Database | Details |
|---|---|---|
| - | Asp 330 | deletion |
| - | Ala 331 | deletion |
| - | Ser 332 | deletion |
| - | Glu 333 | deletion |
| - | Arg 334 | deletion |
| - | His 335 | deletion |
| - | Tyr 336 | deletion |
| - | Leu 337 | deletion |
| - | Ala 338 | deletion |
| - | Asp 339 | deletion |
| - | Asn 340 | deletion |
| - | Pro 341 | deletion |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 4 |
| Total formula weight | 168708.4 | |
| Non-Polymers* | Number of molecules | 13 |
| Total formula weight | 1522.8 | |
| All* | Total formula weight | 170231.2 |
