6R1B
Crystal structure of UgpB from Mycobacterium tuberculosis in complex with glycerophosphocholine
Experimental procedure
| Experimental method | SINGLE WAVELENGTH |
| Source type | SYNCHROTRON |
| Source details | DIAMOND BEAMLINE I04-1 |
| Synchrotron site | Diamond |
| Beamline | I04-1 |
| Temperature [K] | 80 |
| Detector technology | PIXEL |
| Collection date | 2017-12-04 |
| Detector | DECTRIS PILATUS 6M-F |
| Wavelength(s) | 0.92 |
| Spacegroup name | P 21 21 21 |
| Unit cell lengths | 46.110, 169.860, 213.310 |
| Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
| Resolution | 38.687 - 2.270 |
| R-factor | 0.208701378794 |
| Rwork | 0.206 |
| R-free | 0.25598 |
| Structure solution method | MOLECULAR REPLACEMENT |
| Starting model (for MR) | 4mfi |
| RMSD bond length | 0.006 |
| RMSD bond angle | 0.663 |
| Data reduction software | XDS (0.0.5) |
| Data scaling software | XDS (0.0.5) |
| Phasing software | PHASER (1.12_2829) |
| Refinement software | PHENIX (1.12_2829) |
Data quality characteristics
| Overall | Outer shell | |
| Low resolution limit [Å] | 38.690 | 2.330 |
| High resolution limit [Å] | 2.270 | 2.270 |
| Number of reflections | 78213 | |
| <I/σ(I)> | 10.3 | |
| Completeness [%] | 99.2 | |
| Redundancy | 7.8 | |
| CC(1/2) | 0.997 |
Crystallization Conditions
| crystal ID | method | pH | temperature | details |
| 1 | VAPOR DIFFUSION, SITTING DROP | 8.5 | 295.15 | 0.2 M MgCl2, 0.1 M Tris pH 8.5, 20% PEG 8,000, 10 mM Glycerol-3-phosphocholine |






