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6QUW

Crystal Structure of KRAS-G12D in Complex with Natural Product-Like Compound 9b

Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1A, B
(A, B)
GTPase KRaspolymer17019386.82UniProt (P01116)
Pfam (PF00071)
Homo sapiens (Human)K-Ras 2,Ki-Ras,c-K-ras,c-Ki-ras
2C, E
(A, B)
PHOSPHOMETHYLPHOSPHONIC ACID GUANYLATE ESTERnon-polymer521.22Chemie (GCP)
3D, F
(A, B)
MAGNESIUM IONnon-polymer24.32Chemie (MG)
4G
(B)
(3~{a}~{R},8~{b}~{S})-2,2,3~{a},8~{b}-tetramethyl-3,4-dihydro-1~{H}-pyrrolo[2,3-b]indolenon-polymer216.31Chemie (JJQ)
5H, I
(A, B)
waterwater18.0267Chemie (HOH)
Sequence modifications
A, B: 1 - 169 (UniProt: P01116)
PDBExternal DatabaseDetails
Gly 0-expression tag
Asp 12Gly 12engineered mutation
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains2
Total formula weight38773.7
Non-Polymers*Number of molecules5
Total formula weight1307.3
All*Total formula weight40081.0
*Water molecules are not included.

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PDB entries from 2026-02-04

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