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6QR2

Crystal structure of TrmD, a tRNA-(N1G37) methyltransferase, from Mycobacterium abscessus in complex with inhibitor

Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1A, B
(A, B)
tRNA (guanine-N(1)-)-methyltransferasepolymer24426434.72UniProt (B1MDI3)
Pfam (PF01746)
Mycobacterium abscessusM1G-methyltransferase,tRNA [GM37] methyltransferase
2C, F
(A, B)
5-azanyl-3-[1-[(2-oxidanylpyridin-3-yl)methyl]indol-6-yl]-1~{H}-pyrazole-4-carbonitrilenon-polymer330.32Chemie (JQB)
3D, E, G
(A, B)
SULFATE IONnon-polymer96.13Chemie (SO4)
4H, I
(A, B)
waterwater18.0300Chemie (HOH)
Sequence modifications
A, B: 1 - 242 (UniProt: B1MDI3)
PDBExternal DatabaseDetails
Gly -1-expression tag
Ser 0-expression tag
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains2
Total formula weight52869.3
Non-Polymers*Number of molecules5
Total formula weight948.9
All*Total formula weight53818.2
*Water molecules are not included.

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PDB entries from 2025-06-11

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