6QLV
Crystal structure of W200H UbiX in complex with a geranyl-FMN N5 adduct
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A, B, C, D, E... (A, B, C, D, E...) | Flavin prenyltransferase UbiX | polymer | 230 | 24748.3 | 12 | UniProt (A0A072ZCW8) Pfam (PF02441) | Pseudomonas aeruginosa | |
| 2 | FA, KA, M, NA, Q... (G, H, A, I, B...) | [(2~{Z})-3,7-dimethylocta-2,6-dienyl] dihydrogen phosphate | non-polymer | 234.2 | 9 | Chemie (HZZ) | |||
| 3 | BA, JA, N, O, QA... (F, H, A, B, J...) | FLAVIN MONONUCLEOTIDE | non-polymer | 456.3 | 9 | Chemie (FMN) | |||
| 4 | CA, GA, LA, OA, P... (F, G, H, I, B...) | ACETATE ION | non-polymer | 59.0 | 7 | Chemie (ACT) | |||
| 5 | DA, IA, MA, R, TA... (F, G, I, B, J...) | SODIUM ION | non-polymer | 23.0 | 7 | Chemie (NA) | |||
| 6 | HA, PA, U (G, I, C) | [(2~{R},3~{S},4~{S})-5-[5-[(2~{Z})-3,7-dimethylocta-2,6-dienyl]-7,8-dimethyl-2,4-bis(oxidanylidene)-1~{H}-benzo[g]pteridin-10-yl]-2,3,4-tris(oxidanyl)pentyl] dihydrogen phosphate | non-polymer | 594.6 | 3 | Chemie (HJN) | |||
| 7 | AA, EA, Y (E, F, D) | PHOSPHATE ION | non-polymer | 95.0 | 3 | Chemie (PO4) | |||
| 8 | AB, BB, CB, DB, EB... (C, D, E, F, G...) | water | water | 18.0 | 879 | Chemie (HOH) |
Sequence modifications
A, B, C, D, E, F, G, H, I, J, K, L: 1 - 209 (UniProt: A0A072ZCW8)
| PDB | External Database | Details |
|---|---|---|
| Met -20 | - | initiating methionine |
| His -19 | - | expression tag |
| His -18 | - | expression tag |
| His -17 | - | expression tag |
| His -16 | - | expression tag |
| His -15 | - | expression tag |
| His -14 | - | expression tag |
| Ser -13 | - | expression tag |
| Ser -12 | - | expression tag |
| Gly -11 | - | expression tag |
| Val -10 | - | expression tag |
| Asp -9 | - | expression tag |
| Leu -8 | - | expression tag |
| Gly -7 | - | expression tag |
| Thr -6 | - | expression tag |
| Glu -5 | - | expression tag |
| Asn -4 | - | expression tag |
| Leu -3 | - | expression tag |
| Tyr -2 | - | expression tag |
| Gln -1 | - | expression tag |
| Ser 0 | - | expression tag |
| His 200 | Trp 200 | engineered mutation |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 12 |
| Total formula weight | 296979.1 | |
| Non-Polymers* | Number of molecules | 38 |
| Total formula weight | 8858.1 | |
| All* | Total formula weight | 305837.2 |
