6QLV
Crystal structure of W200H UbiX in complex with a geranyl-FMN N5 adduct
Functional Information from GO Data
| Chain | GOid | namespace | contents |
| A | 0000166 | molecular_function | nucleotide binding |
| A | 0003824 | molecular_function | catalytic activity |
| A | 0004659 | molecular_function | prenyltransferase activity |
| A | 0016740 | molecular_function | transferase activity |
| A | 0016829 | molecular_function | lyase activity |
| A | 0016831 | molecular_function | carboxy-lyase activity |
| A | 0106141 | molecular_function | flavin prenyltransferase activity |
| B | 0000166 | molecular_function | nucleotide binding |
| B | 0003824 | molecular_function | catalytic activity |
| B | 0004659 | molecular_function | prenyltransferase activity |
| B | 0016740 | molecular_function | transferase activity |
| B | 0016829 | molecular_function | lyase activity |
| B | 0016831 | molecular_function | carboxy-lyase activity |
| B | 0106141 | molecular_function | flavin prenyltransferase activity |
| C | 0000166 | molecular_function | nucleotide binding |
| C | 0003824 | molecular_function | catalytic activity |
| C | 0004659 | molecular_function | prenyltransferase activity |
| C | 0016740 | molecular_function | transferase activity |
| C | 0016829 | molecular_function | lyase activity |
| C | 0016831 | molecular_function | carboxy-lyase activity |
| C | 0106141 | molecular_function | flavin prenyltransferase activity |
| D | 0000166 | molecular_function | nucleotide binding |
| D | 0003824 | molecular_function | catalytic activity |
| D | 0004659 | molecular_function | prenyltransferase activity |
| D | 0016740 | molecular_function | transferase activity |
| D | 0016829 | molecular_function | lyase activity |
| D | 0016831 | molecular_function | carboxy-lyase activity |
| D | 0106141 | molecular_function | flavin prenyltransferase activity |
| E | 0000166 | molecular_function | nucleotide binding |
| E | 0003824 | molecular_function | catalytic activity |
| E | 0004659 | molecular_function | prenyltransferase activity |
| E | 0016740 | molecular_function | transferase activity |
| E | 0016829 | molecular_function | lyase activity |
| E | 0016831 | molecular_function | carboxy-lyase activity |
| E | 0106141 | molecular_function | flavin prenyltransferase activity |
| F | 0000166 | molecular_function | nucleotide binding |
| F | 0003824 | molecular_function | catalytic activity |
| F | 0004659 | molecular_function | prenyltransferase activity |
| F | 0016740 | molecular_function | transferase activity |
| F | 0016829 | molecular_function | lyase activity |
| F | 0016831 | molecular_function | carboxy-lyase activity |
| F | 0106141 | molecular_function | flavin prenyltransferase activity |
| G | 0000166 | molecular_function | nucleotide binding |
| G | 0003824 | molecular_function | catalytic activity |
| G | 0004659 | molecular_function | prenyltransferase activity |
| G | 0016740 | molecular_function | transferase activity |
| G | 0016829 | molecular_function | lyase activity |
| G | 0016831 | molecular_function | carboxy-lyase activity |
| G | 0106141 | molecular_function | flavin prenyltransferase activity |
| H | 0000166 | molecular_function | nucleotide binding |
| H | 0003824 | molecular_function | catalytic activity |
| H | 0004659 | molecular_function | prenyltransferase activity |
| H | 0016740 | molecular_function | transferase activity |
| H | 0016829 | molecular_function | lyase activity |
| H | 0016831 | molecular_function | carboxy-lyase activity |
| H | 0106141 | molecular_function | flavin prenyltransferase activity |
| I | 0000166 | molecular_function | nucleotide binding |
| I | 0003824 | molecular_function | catalytic activity |
| I | 0004659 | molecular_function | prenyltransferase activity |
| I | 0016740 | molecular_function | transferase activity |
| I | 0016829 | molecular_function | lyase activity |
| I | 0016831 | molecular_function | carboxy-lyase activity |
| I | 0106141 | molecular_function | flavin prenyltransferase activity |
| J | 0000166 | molecular_function | nucleotide binding |
| J | 0003824 | molecular_function | catalytic activity |
| J | 0004659 | molecular_function | prenyltransferase activity |
| J | 0016740 | molecular_function | transferase activity |
| J | 0016829 | molecular_function | lyase activity |
| J | 0016831 | molecular_function | carboxy-lyase activity |
| J | 0106141 | molecular_function | flavin prenyltransferase activity |
| K | 0000166 | molecular_function | nucleotide binding |
| K | 0003824 | molecular_function | catalytic activity |
| K | 0004659 | molecular_function | prenyltransferase activity |
| K | 0016740 | molecular_function | transferase activity |
| K | 0016829 | molecular_function | lyase activity |
| K | 0016831 | molecular_function | carboxy-lyase activity |
| K | 0106141 | molecular_function | flavin prenyltransferase activity |
| L | 0000166 | molecular_function | nucleotide binding |
| L | 0003824 | molecular_function | catalytic activity |
| L | 0004659 | molecular_function | prenyltransferase activity |
| L | 0016740 | molecular_function | transferase activity |
| L | 0016829 | molecular_function | lyase activity |
| L | 0016831 | molecular_function | carboxy-lyase activity |
| L | 0106141 | molecular_function | flavin prenyltransferase activity |
Functional Information from PDB Data
| site_id | AC1 |
| Number of Residues | 12 |
| Details | binding site for residue HZZ A 301 |
| Chain | Residue |
| A | TRP84 |
| J | ARG139 |
| J | GLU140 |
| J | FMN301 |
| A | SER90 |
| A | GLY91 |
| A | ARG122 |
| A | LYS129 |
| A | HOH419 |
| E | TYR169 |
| E | ARG185 |
| E | HOH429 |
| site_id | AC2 |
| Number of Residues | 20 |
| Details | binding site for residue FMN A 302 |
| Chain | Residue |
| A | THR12 |
| A | GLY13 |
| A | SER15 |
| A | SER39 |
| A | ALA41 |
| A | VAL45 |
| A | SER104 |
| A | THR105 |
| A | THR107 |
| A | ARG139 |
| A | GLU140 |
| A | HOH406 |
| A | HOH424 |
| A | HOH433 |
| A | HOH439 |
| A | HOH444 |
| L | TRP84 |
| L | CYS116 |
| L | ARG122 |
| L | HZZ302 |
| site_id | AC3 |
| Number of Residues | 22 |
| Details | binding site for residue FMN B 301 |
| Chain | Residue |
| B | THR12 |
| B | GLY13 |
| B | ALA14 |
| B | SER15 |
| B | SER39 |
| B | ALA41 |
| B | VAL45 |
| B | SER104 |
| B | THR105 |
| B | THR107 |
| B | ARG139 |
| B | HOH406 |
| B | HOH407 |
| B | HOH422 |
| B | HOH429 |
| B | HOH442 |
| B | HOH443 |
| B | HOH461 |
| I | TRP84 |
| I | CYS116 |
| I | ARG122 |
| I | HZZ302 |
| site_id | AC4 |
| Number of Residues | 4 |
| Details | binding site for residue ACT B 302 |
| Chain | Residue |
| B | LYS40 |
| B | GLN81 |
| B | ASN118 |
| B | HOH406 |
| site_id | AC5 |
| Number of Residues | 12 |
| Details | binding site for residue HZZ B 303 |
| Chain | Residue |
| B | ALA89 |
| B | SER90 |
| B | GLY91 |
| B | ARG122 |
| B | LYS129 |
| B | HOH416 |
| E | ARG139 |
| E | GLU140 |
| E | FMN301 |
| J | TYR169 |
| J | ARG185 |
| J | HOH401 |
| site_id | AC6 |
| Number of Residues | 6 |
| Details | binding site for residue NA B 304 |
| Chain | Residue |
| B | ASN117 |
| B | HOH425 |
| B | HOH465 |
| E | GLU121 |
| E | HOH408 |
| E | HOH423 |
| site_id | AC7 |
| Number of Residues | 11 |
| Details | binding site for residue HZZ C 301 |
| Chain | Residue |
| A | TYR169 |
| C | ALA89 |
| C | SER90 |
| C | GLY91 |
| C | ARG122 |
| C | LYS129 |
| C | HOH415 |
| C | HOH416 |
| H | ARG139 |
| H | GLU140 |
| H | FMN301 |
| site_id | AC8 |
| Number of Residues | 2 |
| Details | binding site for residue ACT C 302 |
| Chain | Residue |
| C | GLU31 |
| C | GLY70 |
| site_id | AC9 |
| Number of Residues | 22 |
| Details | binding site for residue HJN C 303 |
| Chain | Residue |
| C | HOH409 |
| C | HOH419 |
| C | HOH429 |
| C | HOH433 |
| C | HOH435 |
| C | HOH438 |
| D | TRP84 |
| D | ALA89 |
| D | SER90 |
| D | CYS116 |
| D | PO4303 |
| I | TYR169 |
| C | THR12 |
| C | GLY13 |
| C | SER15 |
| C | SER39 |
| C | ALA41 |
| C | VAL45 |
| C | SER104 |
| C | THR105 |
| C | THR107 |
| C | ARG139 |
| site_id | AD1 |
| Number of Residues | 3 |
| Details | binding site for residue NA C 304 |
| Chain | Residue |
| C | ASN117 |
| H | GLU121 |
| H | HOH452 |
| site_id | AD2 |
| Number of Residues | 7 |
| Details | binding site for residue NA D 301 |
| Chain | Residue |
| C | GLU121 |
| C | HOH429 |
| C | HOH433 |
| C | HOH456 |
| D | ASN117 |
| D | HOH406 |
| D | HOH460 |
| site_id | AD3 |
| Number of Residues | 22 |
| Details | binding site for residue FMN D 302 |
| Chain | Residue |
| D | THR12 |
| D | GLY13 |
| D | ALA14 |
| D | SER15 |
| D | SER39 |
| D | ALA41 |
| D | LEU44 |
| D | VAL45 |
| D | SER104 |
| D | THR105 |
| D | THR107 |
| D | ARG139 |
| D | HOH410 |
| D | HOH420 |
| D | HOH432 |
| D | HOH434 |
| D | HOH443 |
| D | HOH445 |
| H | TRP84 |
| H | CYS116 |
| H | ARG122 |
| H | HZZ302 |
| site_id | AD4 |
| Number of Residues | 10 |
| Details | binding site for residue PO4 D 303 |
| Chain | Residue |
| C | ARG139 |
| C | GLU140 |
| C | HJN303 |
| D | SER90 |
| D | GLY91 |
| D | ARG122 |
| D | LYS129 |
| D | HOH401 |
| D | HOH439 |
| I | TYR169 |
| site_id | AD5 |
| Number of Residues | 23 |
| Details | binding site for residue FMN E 301 |
| Chain | Residue |
| B | TRP84 |
| B | CYS116 |
| B | ARG122 |
| B | HZZ303 |
| E | THR12 |
| E | GLY13 |
| E | ALA14 |
| E | SER15 |
| E | SER39 |
| E | ALA41 |
| E | LEU44 |
| E | VAL45 |
| E | SER104 |
| E | THR105 |
| E | THR107 |
| E | ARG139 |
| E | GLU140 |
| E | HOH405 |
| E | HOH408 |
| E | HOH413 |
| E | HOH423 |
| E | HOH431 |
| E | HOH451 |
| site_id | AD6 |
| Number of Residues | 10 |
| Details | binding site for residue PO4 E 302 |
| Chain | Residue |
| C | TYR169 |
| E | SER90 |
| E | GLY91 |
| E | ARG122 |
| E | LYS129 |
| E | HOH417 |
| E | HOH425 |
| I | ARG139 |
| I | GLU140 |
| I | HJN304 |
| site_id | AD7 |
| Number of Residues | 20 |
| Details | binding site for residue FMN F 301 |
| Chain | Residue |
| F | THR12 |
| F | GLY13 |
| F | SER15 |
| F | SER39 |
| F | ALA41 |
| F | LEU44 |
| F | VAL45 |
| F | SER104 |
| F | THR105 |
| F | THR107 |
| F | ARG139 |
| F | HOH407 |
| F | HOH412 |
| F | HOH422 |
| F | HOH426 |
| F | HOH434 |
| K | TRP84 |
| K | CYS116 |
| K | ARG122 |
| K | HZZ301 |
| site_id | AD8 |
| Number of Residues | 4 |
| Details | binding site for residue ACT F 302 |
| Chain | Residue |
| F | SER39 |
| F | LYS40 |
| F | GLN81 |
| F | HOH411 |
| site_id | AD9 |
| Number of Residues | 7 |
| Details | binding site for residue NA F 303 |
| Chain | Residue |
| F | ASN117 |
| F | HOH416 |
| F | HOH447 |
| G | GLU121 |
| G | HOH405 |
| G | HOH427 |
| G | HOH433 |
| site_id | AE1 |
| Number of Residues | 10 |
| Details | binding site for residue PO4 F 304 |
| Chain | Residue |
| D | TYR169 |
| F | SER90 |
| F | GLY91 |
| F | ARG122 |
| F | LYS129 |
| F | HOH406 |
| F | HOH437 |
| G | ARG139 |
| G | GLU140 |
| G | HJN303 |
| site_id | AE2 |
| Number of Residues | 11 |
| Details | binding site for residue HZZ G 301 |
| Chain | Residue |
| G | ALA89 |
| G | SER90 |
| G | GLY91 |
| G | ARG122 |
| G | LYS129 |
| G | HOH403 |
| G | HOH421 |
| K | ARG139 |
| K | GLU140 |
| K | FMN302 |
| L | TYR169 |
| site_id | AE3 |
| Number of Residues | 4 |
| Details | binding site for residue ACT G 302 |
| Chain | Residue |
| G | SER39 |
| G | LYS40 |
| G | GLN81 |
| G | HOH402 |
| site_id | AE4 |
| Number of Residues | 25 |
| Details | binding site for residue HJN G 303 |
| Chain | Residue |
| D | TYR169 |
| F | TRP84 |
| F | ALA89 |
| F | SER90 |
| F | CYS116 |
| F | PO4304 |
| F | HOH447 |
| G | THR12 |
| G | GLY13 |
| G | SER15 |
| G | SER39 |
| G | ALA41 |
| G | LEU44 |
| G | VAL45 |
| G | SER104 |
| G | THR105 |
| G | THR107 |
| G | ARG139 |
| G | GLU140 |
| G | HOH413 |
| G | HOH418 |
| G | HOH427 |
| G | HOH431 |
| G | HOH433 |
| G | HOH441 |
| site_id | AE5 |
| Number of Residues | 7 |
| Details | binding site for residue NA G 304 |
| Chain | Residue |
| G | ASN117 |
| G | HOH425 |
| G | HOH446 |
| K | GLU121 |
| K | HOH407 |
| K | HOH418 |
| K | HOH454 |
| site_id | AE6 |
| Number of Residues | 21 |
| Details | binding site for residue FMN H 301 |
| Chain | Residue |
| C | TRP84 |
| C | CYS116 |
| C | ARG122 |
| C | HZZ301 |
| H | THR12 |
| H | GLY13 |
| H | ALA14 |
| H | SER15 |
| H | SER39 |
| H | ALA41 |
| H | VAL45 |
| H | SER104 |
| H | THR105 |
| H | THR107 |
| H | ARG139 |
| H | HOH410 |
| H | HOH431 |
| H | HOH433 |
| H | HOH434 |
| H | HOH444 |
| H | HOH452 |
| site_id | AE7 |
| Number of Residues | 11 |
| Details | binding site for residue HZZ H 302 |
| Chain | Residue |
| D | ARG139 |
| D | GLU140 |
| D | FMN302 |
| G | TYR169 |
| H | TRP84 |
| H | SER90 |
| H | GLY91 |
| H | ARG122 |
| H | LYS129 |
| H | HOH421 |
| H | HOH422 |
| site_id | AE8 |
| Number of Residues | 4 |
| Details | binding site for residue ACT H 303 |
| Chain | Residue |
| H | SER39 |
| H | LYS40 |
| H | GLN81 |
| H | HOH401 |
| site_id | AE9 |
| Number of Residues | 7 |
| Details | binding site for residue NA I 301 |
| Chain | Residue |
| B | GLU121 |
| B | HOH429 |
| B | HOH442 |
| B | HOH453 |
| B | HOH461 |
| I | ASN117 |
| I | HOH424 |
| site_id | AF1 |
| Number of Residues | 12 |
| Details | binding site for residue HZZ I 302 |
| Chain | Residue |
| B | ARG139 |
| B | GLU140 |
| B | FMN301 |
| F | TYR169 |
| I | TRP84 |
| I | MET85 |
| I | SER90 |
| I | GLY91 |
| I | ARG122 |
| I | LYS129 |
| I | HOH408 |
| I | HOH415 |
| site_id | AF2 |
| Number of Residues | 4 |
| Details | binding site for residue ACT I 303 |
| Chain | Residue |
| I | SER39 |
| I | LYS40 |
| I | GLN81 |
| I | HOH417 |
| site_id | AF3 |
| Number of Residues | 23 |
| Details | binding site for residue HJN I 304 |
| Chain | Residue |
| C | TYR169 |
| E | TRP84 |
| E | ALA89 |
| E | SER90 |
| E | CYS116 |
| E | ARG122 |
| E | PO4302 |
| I | THR12 |
| I | GLY13 |
| I | SER15 |
| I | SER39 |
| I | ALA41 |
| I | LEU44 |
| I | VAL45 |
| I | SER104 |
| I | THR105 |
| I | THR107 |
| I | ARG139 |
| I | HOH407 |
| I | HOH409 |
| I | HOH417 |
| I | HOH421 |
| I | HOH438 |
| site_id | AF4 |
| Number of Residues | 20 |
| Details | binding site for residue FMN J 301 |
| Chain | Residue |
| A | TRP84 |
| A | CYS116 |
| A | ARG122 |
| A | HZZ301 |
| J | THR12 |
| J | GLY13 |
| J | SER15 |
| J | SER39 |
| J | ALA41 |
| J | VAL45 |
| J | SER104 |
| J | THR105 |
| J | THR107 |
| J | ARG139 |
| J | HOH404 |
| J | HOH415 |
| J | HOH421 |
| J | HOH425 |
| J | HOH443 |
| J | HOH448 |
| site_id | AF5 |
| Number of Residues | 3 |
| Details | binding site for residue ACT J 302 |
| Chain | Residue |
| J | SER39 |
| J | LYS40 |
| J | GLN81 |
| site_id | AF6 |
| Number of Residues | 12 |
| Details | binding site for residue HZZ J 303 |
| Chain | Residue |
| J | TRP84 |
| J | MET85 |
| J | SER90 |
| J | GLY91 |
| J | ARG122 |
| J | LYS129 |
| J | HOH431 |
| K | TYR169 |
| K | HOH421 |
| L | ARG139 |
| L | GLU140 |
| L | FMN301 |
| site_id | AF7 |
| Number of Residues | 7 |
| Details | binding site for residue NA J 304 |
| Chain | Residue |
| J | ASN117 |
| J | HOH403 |
| J | HOH456 |
| L | GLU121 |
| L | HOH406 |
| L | HOH415 |
| L | HOH422 |
| site_id | AF8 |
| Number of Residues | 11 |
| Details | binding site for residue HZZ K 301 |
| Chain | Residue |
| B | TYR169 |
| F | ARG139 |
| F | GLU140 |
| F | FMN301 |
| K | TRP84 |
| K | SER90 |
| K | GLY91 |
| K | ARG122 |
| K | LYS129 |
| K | HOH415 |
| K | HOH455 |
| site_id | AF9 |
| Number of Residues | 21 |
| Details | binding site for residue FMN K 302 |
| Chain | Residue |
| G | TRP84 |
| G | CYS116 |
| G | ARG122 |
| G | HZZ301 |
| K | THR12 |
| K | GLY13 |
| K | SER15 |
| K | SER39 |
| K | ALA41 |
| K | LEU44 |
| K | VAL45 |
| K | SER104 |
| K | THR105 |
| K | THR107 |
| K | ARG139 |
| K | HOH407 |
| K | HOH408 |
| K | HOH411 |
| K | HOH433 |
| K | HOH439 |
| K | HOH454 |
| site_id | AG1 |
| Number of Residues | 20 |
| Details | binding site for residue FMN L 301 |
| Chain | Residue |
| J | TRP84 |
| J | CYS116 |
| J | ARG122 |
| J | HZZ303 |
| L | THR12 |
| L | GLY13 |
| L | SER15 |
| L | SER39 |
| L | ALA41 |
| L | VAL45 |
| L | SER104 |
| L | THR105 |
| L | THR107 |
| L | ARG139 |
| L | HOH404 |
| L | HOH415 |
| L | HOH417 |
| L | HOH422 |
| L | HOH423 |
| L | HOH445 |
| site_id | AG2 |
| Number of Residues | 11 |
| Details | binding site for residue HZZ L 302 |
| Chain | Residue |
| A | ARG139 |
| A | GLU140 |
| A | FMN302 |
| A | HOH417 |
| H | TYR169 |
| L | TRP84 |
| L | SER90 |
| L | GLY91 |
| L | ARG122 |
| L | LYS129 |
| L | HOH444 |
