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6PTV

Crystal structure of a DnaN sliding clamp (DNA polymerase III subunit beta) from Rickettsia rickettsii bound to griselimycin

Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1A, B, D, F
(A, B, C, D)
Beta sliding clamppolymer38743376.64UniProt (A0A0H3AWV3)
Pfam (PF00712)
Pfam (PF02767)
Pfam (PF02768)
Rickettsia rickettsii (strain Sheila Smith)
2C, E
(X, Y)
ACE-MVA-MP8-NZC-LEU-MP8-LEU-MVA-PRO-MLU-GLYpolymer111115.42BIRD (PRD_002311)Streptomyces griseus
3G, H
(A, D)
(4S)-2-METHYL-2,4-PENTANEDIOLnon-polymer118.22Chemie (MPD)
4I, J, K, L, M...
(A, B, X, C, Y...)
waterwater18.01301Chemie (HOH)
Sequence modifications
A, B, C, D: 1 - 379 (UniProt: A0A0H3AWV3)
PDBExternal DatabaseDetails
Met -7-initiating methionine
Ala -6-expression tag
His -5-expression tag
His -4-expression tag
His -3-expression tag
His -2-expression tag
His -1-expression tag
His 0-expression tag
Ile 373Val 373conflict
Leu 375Met 375conflict
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains6
Total formula weight175737.5
Non-Polymers*Number of molecules2
Total formula weight236.3
All*Total formula weight175973.8
*Water molecules are not included.

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PDB entries from 2024-10-30

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