6PPV
Structure of S. pombe Lsm1-7 with RNA, polyuridine with 3' guanosine
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A (A) | U6 snRNA-associated Sm-like protein LSm1 | polymer | 86 | 9754.2 | 1 | UniProt (P87173) Pfam (PF01423) | Schizosaccharomyces pombe (strain 972 / ATCC 24843) (Fission yeast) | |
| 2 | B (B) | U6 snRNA-associated Sm-like protein LSm2 | polymer | 96 | 11003.8 | 1 | UniProt (O94408) Pfam (PF01423) | Schizosaccharomyces pombe (strain 972 / ATCC 24843) (Fission yeast) | |
| 3 | C (C) | Probable U6 snRNA-associated Sm-like protein LSm3 | polymer | 95 | 10824.3 | 1 | UniProt (Q9Y7M4) Pfam (PF01423) | Schizosaccharomyces pombe (strain 972 / ATCC 24843) (Fission yeast) | |
| 4 | D (D) | Probable U6 snRNA-associated Sm-like protein LSm4 | polymer | 129 | 15007.0 | 1 | UniProt (O14352) Pfam (PF01423) | Schizosaccharomyces pombe (strain 972 / ATCC 24843) (Fission yeast) | |
| 5 | E (E) | U6 snRNA-associated Sm-like protein LSm5 | polymer | 80 | 8860.3 | 1 | UniProt (O42978) Pfam (PF01423) | Schizosaccharomyces pombe (strain 972 / ATCC 24843) (Fission yeast) | |
| 6 | F (F) | U6 snRNA-associated Sm-like protein LSm6 | polymer | 77 | 8489.6 | 1 | UniProt (Q9UUI1) Pfam (PF01423) | Schizosaccharomyces pombe (strain 972 / ATCC 24843) (Fission yeast) | |
| 7 | G (G) | U6 snRNA-associated Sm-like protein LSm7 | polymer | 113 | 12488.2 | 1 | UniProt (O74499) Pfam (PF01423) | Schizosaccharomyces pombe (strain 972 / ATCC 24843) (Fission yeast) | |
| 8 | H (H) | RNA (5'-R(*AP*UP*UP*UP*UP*G)-3') | polymer | 6 | 1854.1 | 1 | synthetic construct | ||
| 9 | I, J, K, L, M... (A, B, C, D, E...) | water | water | 18.0 | 190 | Chemie (HOH) |
Sequence modifications
A: 1 - 84 (UniProt: P87173)
C: 1 - 93 (UniProt: Q9Y7M4)
D: 1 - 121 (UniProt: O14352)
F: 1 - 75 (UniProt: Q9UUI1)
| PDB | External Database | Details |
|---|---|---|
| Gly -1 | - | expression tag |
| Ser 0 | - | expression tag |
| PDB | External Database | Details |
|---|---|---|
| Gly -1 | - | expression tag |
| Ser 0 | - | expression tag |
| PDB | External Database | Details |
|---|---|---|
| Trp 122 | - | expression tag |
| Ser 123 | - | expression tag |
| His 124 | - | expression tag |
| Pro 125 | - | expression tag |
| Gln 126 | - | expression tag |
| Phe 127 | - | expression tag |
| Glu 128 | - | expression tag |
| Lys 129 | - | expression tag |
| PDB | External Database | Details |
|---|---|---|
| Gly -1 | - | expression tag |
| Ser 0 | - | expression tag |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 8 |
| Total formula weight | 78281.5 | |
| All* | Total formula weight | 78281.5 |
