6PPQ
Structure of S. pombe Lsm1-7 with RNA, polyuridine with 3' adenosine
Entity
Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
1 | A | U6 snRNA-associated Sm-like protein LSm1 | polymer | 86 | 9754.2 | 1 | UniProt (P87173) Pfam (PF01423) In PDB | Schizosaccharomyces pombe (strain 972 / ATCC 24843) (Fission yeast) | |
2 | B | U6 snRNA-associated Sm-like protein LSm2 | polymer | 96 | 11003.8 | 1 | UniProt (O94408) Pfam (PF01423) In PDB | Schizosaccharomyces pombe (strain 972 / ATCC 24843) (Fission yeast) | |
3 | C | Probable U6 snRNA-associated Sm-like protein LSm3 | polymer | 95 | 10824.3 | 1 | UniProt (Q9Y7M4) Pfam (PF01423) In PDB | Schizosaccharomyces pombe (strain 972 / ATCC 24843) (Fission yeast) | |
4 | D | Probable U6 snRNA-associated Sm-like protein LSm4 | polymer | 129 | 15007.0 | 1 | UniProt (O14352) Pfam (PF01423) In PDB | Schizosaccharomyces pombe (strain 972 / ATCC 24843) (Fission yeast) | |
5 | E | U6 snRNA-associated Sm-like protein LSm5 | polymer | 80 | 8860.3 | 1 | UniProt (O42978) Pfam (PF01423) In PDB | Schizosaccharomyces pombe (strain 972 / ATCC 24843) (Fission yeast) | |
6 | F | U6 snRNA-associated Sm-like protein LSm6 | polymer | 77 | 8489.6 | 1 | UniProt (Q9UUI1) Pfam (PF01423) In PDB | Schizosaccharomyces pombe (strain 972 / ATCC 24843) (Fission yeast) | |
7 | G | U6 snRNA-associated Sm-like protein LSm7 | polymer | 119 | 13317.1 | 1 | UniProt (O74499) Pfam (PF01423) In PDB | Schizosaccharomyces pombe (strain 972 / ATCC 24843) (Fission yeast) | |
8 | H | RNA (5'-R(*UP*UP*UP*UP*UP*A)-3') | polymer | 6 | 1815.1 | 1 | synthetic construct | ||
9 | water | water | 18.0 | 302 | Chemie (HOH) |
Sequence modifications
A: 1 - 84 (UniProt: P87173)
C: 1 - 93 (UniProt: Q9Y7M4)
D: 1 - 121 (UniProt: O14352)
F: 1 - 75 (UniProt: Q9UUI1)
G: 1 - 113 (UniProt: O74499)
PDB | External Database | Details |
---|---|---|
Gly -1 | - | expression tag |
Ser 0 | - | expression tag |
PDB | External Database | Details |
---|---|---|
Gly -1 | - | expression tag |
Ser 0 | - | expression tag |
PDB | External Database | Details |
---|---|---|
Trp 122 | - | expression tag |
Ser 123 | - | expression tag |
His 124 | - | expression tag |
Pro 125 | - | expression tag |
Gln 126 | - | expression tag |
Phe 127 | - | expression tag |
Glu 128 | - | expression tag |
Lys 129 | - | expression tag |
PDB | External Database | Details |
---|---|---|
Gly -1 | - | expression tag |
Ser 0 | - | expression tag |
PDB | External Database | Details |
---|---|---|
His 114 | - | expression tag |
His 115 | - | expression tag |
His 116 | - | expression tag |
His 117 | - | expression tag |
His 118 | - | expression tag |
His 119 | - | expression tag |
Sequence viewer
Contents of the asymmetric unit
Polymers | Number of chains | 8 |
Total formula weight | 79071.4 | |
All* | Total formula weight | 79071.4 |